Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60671g00005 ATGTTGTTGCTTGTTCTTGTGCCTCGTATGGAAGAAGGGGAAGGTTCTGCTACAATGGAAGGTTTGAGTTCAGATCCATCAATGGATTCGGTTTCGGATAATTCTTGTGATTTAAGCATCACAAAACAATTTTTTTGTGATGAGCAGTATGTTCCAAAGGTTGGCATGTTTTTTGAGTCACTTGAGAAAGCTAGAGATTTCTACAAGGATTATGCTAAACGGGCAGGGTTTGCTATAAAGATTAGGAACACAAATAAGAGCAAGAAATCAAATGAAATATTGAACCAGCTGCTGTCATGTAATAGGGAAGGGAAAAGAAGGTCGGATTTGCCAGTTTCTGAGAAGACAAATCCAGTATATGCTGTTAATTGTCCAGCCAGAGTCTATGTCCATCATATGAAGTATTATGATTTCTAG 417 0.3813 MLLLVLVPRMEEGEGSATMEGLSSDPSMDSVSDNSCDLSITKQFFCDEQYVPKVGMFFESLEKARDFYKDYAKRAGFAIKIRNTNKSKKSNEILNQLLSCNREGKRRSDLPVSEKTNPVYAVNCPARVYVHHMKYYDF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60671g00005 138 Pfam FAR1 DNA-binding domain 66 132 IPR004330 -
Stsc60671g00005 138 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60671g00005 Stsc-Chr60671 30468 32621 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc60671g00005 FAR1 1.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60671g00005 - - aip:110271906 107.457