Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60668g00001 ATGGCAACTAGACTCCAGTTTGAGAATAATTGTGAAGTTGGAGTGTTTTCTAAACTTACTAATGCCTATTGTTTGGTTGCCATAGGAGGATCTGAAAACTTCTACAGTGTATTTGAATCTGAGTTAGCAGATGTCATCCCAGTGATCAAAACATCCATTGGTGGAACTCGAATTATTGGTCGCCTTTGTGCAGGAAACAAAAATGGGCTTCTTGTGCCCCATACAACTACAGACCAAGGTGATTCCGGTTTTTGTTATGTTAGTTTTGATTCCTTGTACTACATGATTCTATATAAATATCTCATGTGCCTCCCAAAACAGCATATATGA 330 0.3818 MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSVFESELADVIPVIKTSIGGTRIIGRLCAGNKNGLLVPHTTTDQGDSGFCYVSFDSLYYMILYKYLMCLPKQHI 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60668g00001 109 Gene3D - 1 83 - -
Stsc60668g00001 109 SUPERFAMILY Pentein 1 81 - -
Stsc60668g00001 109 SMART eIF6neu2 3 104 IPR002769 GO:0042256|GO:0043022
Stsc60668g00001 109 Pfam eIF-6 family 4 79 IPR002769 GO:0042256|GO:0043022
Stsc60668g00001 109 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 80 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60668g00001 Stsc-Chr60668 172 2657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60668g00001 1 79 Eukaryotic Initiation Factors Gene Family AT3G55620 96.203 1.64e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60668g00001 K03264 - ath:AT3G55620 159.458