Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60667g00002 | ATGGCAATAGGGAACTTCAAAGAGGATAGAGCCATAGGAAAAGGTGGATTTGGGACGGTGTACAAAGGGGTGTTTCCTGATGGCAAAGTAGTGGCAGTGAAGAAGCTCCAAATGGAAGGAACTGAGGGTGAGAAAGAGTTCAGAGCCAAAGTGAAGATTCTGAGTGGCCATGGTTTTGGTTGGCCTCATCCAAACCTTGTTACACTCTATAGCCGGTGCCTATATGGTTCACTGAAAATTCTTGTTTATGAGTACATAGGAGGAGGAAGCTTAGAGAATCTTGTCACCGACAAAGTGAGATTAATCCTTTTTGTTTATGAGTACATGAAGGAGGTTCTAGTAGAGACTCATGTTACGGCCACCTTTTTTAGTCCTTTTTGTGATTGGGGAATGTTTATGTACTCATATTAG | 411 | 0.4234 | MAIGNFKEDRAIGKGGFGTVYKGVFPDGKVVAVKKLQMEGTEGEKEFRAKVKILSGHGFGWPHPNLVTLYSRCLYGSLKILVYEYIGGGSLENLVTDKVRLILFVYEYMKEVLVETHVTATFFSPFCDWGMFMYSY | 136 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60667g00002 | 136 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 2 | 98 | - | - | |
Stsc60667g00002 | 136 | Pfam | Protein kinase domain | 6 | 100 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60667g00002 | 136 | ProSiteProfiles | Protein kinase domain profile. | 6 | 136 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60667g00002 | 136 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 103 | IPR011009 | - | |
Stsc60667g00002 | 136 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 85 | - | - | |
Stsc60667g00002 | 136 | ProSitePatterns | Protein kinases ATP-binding region signature. | 12 | 35 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60667g00002 | Stsc-Chr60667 | 20908 | 21318 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60667g00002 | 2 | 108 | Receptor kinase-like Gene Family | AT4G21410 | 39.450 | 1.17e-20 | 84.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-2 | Stsc60667g00002 | Pkinase | 4.8e-12 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60667g00002 | - | - | pvu:PHAVU_009G184500g | 166.777 |