Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60664g00007 ATGAGTCGAATACTCGGTCCTGGTTTCCGGTTCCACCCTACGGACGACGAACTAGTTCAGTTCTATCTCCGCCGGAAGATCATCGGAAAACTCAGCCACCACGACCACATCGCCGTCGTCAATATCTACAACTATGAGCCATGGCAACTCCCGGAATTGTCGAAGCTGAATACCAGGGATTTGGAGTGGTATTTCTTCACTGTGCTGGACAAGAAGTATGAGAAGGGGGAGAAGACAAAACGCGCCACCGTCAATGGTTACTGGAAGACTACCGGCAAGGATCGCGAAATCAAGTATGGCGATCGCCATGTCGGCATGAAGAAGACCCTCGTTTACCATGAAGGACGGGCCCCAACTGGCAAGAGATCAAACTGGGTTATGCACGAGTACCGGATGGTCGATCAGAAATTGGCTGAAGCTGGATATCAGCTGGACGCTTATGTGCTGTGTAGAATTTTTGAGAAGAGCGGCATGGGTCCTAAGAATGGAGAGAAGTATGGTGCTCCCTTTAGAGAGGAGGAGTGGTTAGACGATGGTGATCTGCTCGAGCCGAAAGCTGACGAACCTGTGGTTGAGCTGTCTGTTGACCAAAGTGATGCTTTCCTTGAAACTGATGACCTTGACAAGAATCTTGGTGCGCATGTGGTGGATGGAAGTGCTGATTTACCATCAAACCCTCCCAACTTCTTTTATGGGGAGTGTAGTCACTATCCTCAGCATAAACAGGAATTCGTTGAAGTTCCGAAACCTTTGGAAGATCCATACACAGTTGAGGAAAATCACCTTGGGGCCGATCCTAACACAGCTGAGGGAAATCCCCCTGGGCCAGATCCCGACACAGCTGAGGGAAATTCTCCTGGGACAGATTTGTTTGCTGTGGATATGGTAGATCAGTATCTTGCACTTTCAGATGATGATATTCTGAAGTATATATCTTTTGATGATTCTCCTCCGTCAATGGAGGGTGAAAACCCTAGTCCGGAGCACATACCACCTCTTATCCAGCAGAATGTGGAGGAACAGGTCGAGGATGTTTTGGAGAAACAACAGAAGGTGGAGGGAGAAGCCGCATATATTTTCAAGACAAACAAACATGACCTTGAAGCAAATTCAAGCCGTGGAGGAGCTGCTTCAGAAGATGCAAATCCAATTGCAAAACGCTTCAAGAAATGGTTGGATGACATCCCAGCTCCTCCTGCATTTGCTGCAGAGCTTCCATCCAAGAAGGATGCACTTCGGCTTCATTCTGCGCCTCAGTCTTCAAACACCACTCATTTAACTGCTGGCATGGTCAGCATTACGAACATTACTGGAAGAGGCAATGTCAGGAATCCGATGGTGGCAAAATTTGGAGGGTTCAATCATATTATTACCTCTGCTGTTGTTTTGGTACCTGTTTCTGGCTTACTTTATGGTAAGACTCTGTTTGTGCTGATGCATGGATGGGCTTCTCTGATGACATTTTCATTTCTGTTCGTTACGGTGACTTGCAAGATTGGAACCTTCATGTATTCCGGAAAATGA 1524 0.4718 MSRILGPGFRFHPTDDELVQFYLRRKIIGKLSHHDHIAVVNIYNYEPWQLPELSKLNTRDLEWYFFTVLDKKYEKGEKTKRATVNGYWKTTGKDREIKYGDRHVGMKKTLVYHEGRAPTGKRSNWVMHEYRMVDQKLAEAGYQLDAYVLCRIFEKSGMGPKNGEKYGAPFREEEWLDDGDLLEPKADEPVVELSVDQSDAFLETDDLDKNLGAHVVDGSADLPSNPPNFFYGECSHYPQHKQEFVEVPKPLEDPYTVEENHLGADPNTAEGNPPGPDPDTAEGNSPGTDLFAVDMVDQYLALSDDDILKYISFDDSPPSMEGENPSPEHIPPLIQQNVEEQVEDVLEKQQKVEGEAAYIFKTNKHDLEANSSRGGAASEDANPIAKRFKKWLDDIPAPPAFAAELPSKKDALRLHSAPQSSNTTHLTAGMVSITNITGRGNVRNPMVAKFGGFNHIITSAVVLVPVSGLLYGKTLFVLMHGWASLMTFSFLFVTVTCKIGTFMYSGK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60664g00007 507 SUPERFAMILY NAC domain 5 155 IPR036093 GO:0003677|GO:0006355
Stsc60664g00007 507 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Stsc60664g00007 507 MobiDBLite consensus disorder prediction 256 288 - -
Stsc60664g00007 507 Pfam No apical meristem (NAM) protein 7 132 IPR003441 GO:0003677|GO:0006355
Stsc60664g00007 507 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 239 - -
Stsc60664g00007 507 Coils Coil 335 355 - -
Stsc60664g00007 507 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60664g00007 Stsc-Chr60664 50829 53853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60664g00007 368 496 NAC Transcription Factor Family AT5G04410 30.263 1.46e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc60664g00007 NAM 1.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60664g00007 - - adu:107466644 863.988