Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60663g00006 ATGAGAAATAATTTAGAGAGAACTGGAGTAAGACAATACAAGAAATCAGAGCTTCCAAGGCTTAGATGGACACCTCAACTCCATCAACAATTTGTTGAAGCTGTTCAAAGCCTTGGTGGAAAACACAAGGCAACTCCAAAGCAAATTTTGCAGCAGATGCCTGTGAAAGGATTAAGAATTGCTCACATCAAAAGCCATCTTCAGATGTACAGAAATCTGAAGGGACATGCCTCCCTCTCAGGGGATCACTTGATGAAAGATCAATATCAACATGTTAAGGATCACAAAATCAGCTCCATTTCTTCACCAAAAAGATCATCGATAGGAAGCAACTTAAGAGGTTCAAATCATGAAAGGAGGATTCAGAGTGAAGACTTTCTTCATCTATCAAACAATAGAAAAGGTGTTTCACAAATCAGTGAAGAAACTGATTATGATCTAAACCAGGAACATGAATCAAGTGGGGGCTTATTAATTTGTGATGATGAGTTAAACGAAGAAGAAAATAATAATAATAGTAGTAGAATAATTCATCAAATTATTCCTCGTGTCTCATTTTCTTTAAACACTACACCTCTAAAATGGATGATGCAAAATAGTGAGAGTGAAAAACAAGATATAATGCATTTTTCGACTACGACAGCGACGACGACGACAATAACTGCAGCTGATTCTTATGATTCTAGTATCTATGTACCATCATCAAAGCCAAACAATAATTATATAAATTTAGACCTAACAATATGA 747 0.3548 MRNNLERTGVRQYKKSELPRLRWTPQLHQQFVEAVQSLGGKHKATPKQILQQMPVKGLRIAHIKSHLQMYRNLKGHASLSGDHLMKDQYQHVKDHKISSISSPKRSSIGSNLRGSNHERRIQSEDFLHLSNNRKGVSQISEETDYDLNQEHESSGGLLICDDELNEEENNNNSSRIIHQIIPRVSFSLNTTPLKWMMQNSESEKQDIMHFSTTTATTTTITAADSYDSSIYVPSSKPNNNYINLDLTI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60663g00006 248 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Stsc60663g00006 248 MobiDBLite consensus disorder prediction 101 116 - -
Stsc60663g00006 248 FunFam Myb family transcription factor 17 75 - -
Stsc60663g00006 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Stsc60663g00006 248 MobiDBLite consensus disorder prediction 92 124 - -
Stsc60663g00006 248 SUPERFAMILY Homeodomain-like 19 72 IPR009057 -
Stsc60663g00006 248 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 145 IPR046955 GO:0003700
Stsc60663g00006 248 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Stsc60663g00006 248 Gene3D - 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60663g00006 Stsc-Chr60663 32848 36579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60663g00006 9 71 G2-like Transcription Factor Family AT1G14600 66.667 8.71e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc60663g00006 Myb_DNA-binding 3.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60663g00006 - - aip:107608315 330.487