LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc60662g00006	ATGCAGTTATCAATGTCTTGTCTAATTGCAATTGCCTTTGAAGCTAGTGCTGAATGTGTGGATATCATGGAGCTAAATCTTGTGATTAATTTGCCCTCATGGTCTCTGAATATAATTGATGCTCCCCCATGTCCTGATTCTCCGTTGAAGCTTGCATCAACATTGCCCTTGATCCAACCATTTGGTGGTGTATGCCAGGGTTTGTGTCAAGTTGATGAAGAGTGCATTACAAACGTTGGGATGACTTTTCTAACAATTGAAGAAGCTAATGATTTTTATAAAGAGTATGCTAAACAAGCAGGCTTTGCTACTAAAATCAGAAATTCGAATAAGAATAAAGATACCGGAGCAATCAAGAATCAACTTATCATGTGTAGTAGAGAGGGGAAAAGGAGATCTAATTTACCTGAAGTTGAGAAGACTAATCCAATGTCTCCTACAGATTGCCCTGCAAGAATTTATGTGCACATAAAGAAGAATACTCGGCTTTTTATGATTTCAAAGGTTGTTTTGGAGCATTCACATCCATGTTCCACTCATCAAGCTCAAATGTTACCACAACATAGGCAGCTTAGGATGCATGTTCGTCGAGTCATCGATAACAATGATGAAGCTGGGATTAGACCTAGAAAAATATACCAATCTCTTGTTGCAATAATTGAGGGTCGTGAGGAGCTGAATTTTATTGAGAAAGATGTCAGAAATCATGTTATGGGGGAGGTTTGTAATATTTCTGAAGAAGAAGATGCTAAAGAGCTCGGAAAGTACTTTTTGAGAATGAAGGAGCAAAACCCGAGCTTTTTTTTTTCGAGCTTGTTCTTGATGACGATAAGTCAATCAAGAATGCATTTTGGGCTTATGCAAGGAGTCGGGATGCGTTTGAATATTTTGGTGATGTTGTGTCGTTTGACACAACTTAGAATAAAAACAAGTATTTAG	939	0.3791	MQLSMSCLIAIAFEASAECVDIMELNLVINLPSWSLNIIDAPPCPDSPLKLASTLPLIQPFGGVCQGLCQVDEECITNVGMTFLTIEEANDFYKEYAKQAGFATKIRNSNKNKDTGAIKNQLIMCSREGKRRSNLPEVEKTNPMSPTDCPARIYVHIKKNTRLFMISKVVLEHSHPCSTHQAQMLPQHRQLRMHVRRVIDNNDEAGIRPRKIYQSLVAIIEGREELNFIEKDVRNHVMGEVCNISEEEDAKELGKYFLRMKEQNPSFFFSSLFLMTISQSRMHFGLMQGVGMRLNILVMLCRLTQLRIKTSI	312

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc60662g00006	312	Pfam	FAR1 DNA-binding domain	91	178	IPR004330	-
	Stsc60662g00006	312	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	73	231	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc60662g00006	Stsc-Chr60662	32672	37272	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Stsc60662g00006		FAR1	2.8e-15	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc60662g00006	-		-	aip:110271906	238.81