Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60660g00004 ATGGCTAATCACTACTCTCACTCTCATATATGCCAATGTTTGAGTCGCTTGCTCACTCTCCGGCCACATTTTCCGGTCACAATTGCCGGTCACCGGAGAAAGACTGGCCGAGAGTTCGTGGAGCAAGTTTTGGCCTTGGCTCAAGGCTTGCTCGACCTAGGTGTCACATCTGGCGATGTAATTGCGATCTCGGCATTCAACAGTGATTGGTATCTGGAGTGGTTGTTAGCCATTGCATTTGTTGGTGGAATAGTTGCGCCTCTCAACTATCGCTGGGGTTTTGAAGAGGCGAAATTTGCAATGAATGTGGTGAAGCCGGTGATGTTAGTCACTGACGAGTGCAGCCAAACTTGGTACTCAAAACTCCTGAAAACTGATGTTCCCTCTCTGAGATGGTATGCTTTGTTGGATTCCCCTTCCTCAGATTTCGCAAAGGAGTTGAATGGAATAGATGTGTTGCAGTCAGAAATGCTTAAGAAGCATCACGAAAAGCCTCGGCTGTTTGATTATTCCTGGGCGCCGGACTGTGCTGTCCTGATTTGCTTTACTTCAGGAACAACAGGAAAGCCTAAAGGAGTTACACTAAGCCATGGAGCATTGATCATACAATCACTAGCAAAGATTGCCATAGTTGGATACAATGAAGATGATGTTTATCTACACACTACTCCATTATGCCATATTGGGGGATTGTCATCAGCTCTGACCATGCTTATGGTTGGAGGTTGCCATGTCTTGACGCCGAAATTCGATCCAAAATCGGCTGTTGATGCCATAGAACGATATGATGTGACATCTCTGATCACAGTTCCTGCAATAATGGCCAATCTCATTTCTCTAATTAGGCACAAAGAGACATGGAAAGGGGGAGAAACTCTGAAGAAAATACTTAATGGGGGTGGAAGCCTCTCACTTGAGCTAATCAAGGATACTAACCTATTCTTCCATAAAGCTAAGCTTATCTCAGCTTATGGGATGACAGAGACATGTTCTTCATTGACATTCATGACCCTTTATGATCCAATGCATGAAACCAGCATTAGCCAGAACCTTCAAATAGTTGGTGAGGCAGCATCATCAAATTCAATTCACCAGCCTCAAGGTATCTGTGTCGGCAAAGCTGCACCTCATGTAGAACTTAAAATATGTGAGGATGATGGCACTGGTCACACAGGGAGAATTTTAACTAGAGGACCACACACAATGCTCAGGTACTGGGATCAGACTCTCACGAATTCATCAAATGCCAGGAATGAAGCATGGTTTGATACAGGTGACATTGGATCAATTGATAATCATGGTAATTTGTGGCTCCTCGGACGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAAGCAATTCTACAAGGACACCCAGGGATTGCAAGTGTTGTTGTTGTAGGAATCCCAGATGCCTATCTTACAGAAATGGTAGCAGCATGTATCCAACTAGCAGAAAATTGGCACTGGTTAGAGCAATCTAATCATTCAAATCAAGAGTTTCACATATCTTCAAAGAGTCTCCACCAATATTGTATTCAACATAATCTAAGCAGGTTTAAGATACCAAAGGTGTTTGTTCTGTGGAGGAAGCCTTTTCCACTCACTACAACAGGAAAAGTAAGAAGAGACCAAATCCGCAAGGAGTTAATGTGTTTGCCACAATCTTTGCATAGTAATCTTTGA 1707 0.4347 MANHYSHSHICQCLSRLLTLRPHFPVTIAGHRRKTGREFVEQVLALAQGLLDLGVTSGDVIAISAFNSDWYLEWLLAIAFVGGIVAPLNYRWGFEEAKFAMNVVKPVMLVTDECSQTWYSKLLKTDVPSLRWYALLDSPSSDFAKELNGIDVLQSEMLKKHHEKPRLFDYSWAPDCAVLICFTSGTTGKPKGVTLSHGALIIQSLAKIAIVGYNEDDVYLHTTPLCHIGGLSSALTMLMVGGCHVLTPKFDPKSAVDAIERYDVTSLITVPAIMANLISLIRHKETWKGGETLKKILNGGGSLSLELIKDTNLFFHKAKLISAYGMTETCSSLTFMTLYDPMHETSISQNLQIVGEAASSNSIHQPQGICVGKAAPHVELKICEDDGTGHTGRILTRGPHTMLRYWDQTLTNSSNARNEAWFDTGDIGSIDNHGNLWLLGRTNGRIKSGGENIYPEEVEAILQGHPGIASVVVVGIPDAYLTEMVAACIQLAENWHWLEQSNHSNQEFHISSKSLHQYCIQHNLSRFKIPKVFVLWRKPFPLTTTGKVRRDQIRKELMCLPQSLHSNL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60660g00004 568 Gene3D - 1 442 IPR042099 -
Stsc60660g00004 568 CDD AFD_class_I 175 549 - -
Stsc60660g00004 568 ProSitePatterns Putative AMP-binding domain signature. 180 191 IPR020845 -
Stsc60660g00004 568 Gene3D - 444 559 IPR045851 -
Stsc60660g00004 568 Pfam AMP-binding enzyme 24 448 IPR000873 -
Stsc60660g00004 568 PANTHER ACYL-COA SYNTHETASE 6 559 - -
Stsc60660g00004 568 Pfam AMP-binding enzyme C-terminal domain 457 547 IPR025110 -
Stsc60660g00004 568 SUPERFAMILY Acetyl-CoA synthetase-like 9 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60660g00004 Stsc-Chr60660 17141 21140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60660g00004 46 475 Monolignol Biosynthesis Gene Families AT3G21240 29.186 6.46e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60660g00004 K14760 - gmx:100809925 887.871