Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60659g00001 ATGGAGAAATCTCGCAACCGAAAGTCCTCCGTTGCTTCCAGGAACCAACCGCACACACTTGTTCTTCCTCAAGAGAGTAAGCAAGTTCATAGGCAGCGACAACTTCCCGATTTATCTCCTGATTCTGTTTCTTGCGGTGGTGGGGTTGCAGACAAAGATTCCTTCTCCTTCAAATTTGGGTGGAGATCTTCTAAACAACTGTTCGGAACTCCAATTAAGAAGTTACTAGCTGATGAGATGTTGCAGGAAACAGAGTCTAAAAGAAGAAATCCTGGTGTTATTGCCCGATTGATGGGTCTAGATGGCCTGCCTGCTAACAAGCAGCAAAAGGGTTCATCAGAGAATCATGTAGAGAAAGCAAGAAGCAGAGGAACGCCAGACAATGGTCGGTCCTCTAGGAGGAGCTCAAAGGATCAACAAGAATTTAAGGATGTGTTTGAGGTCTCAGAGATCCCAATGGTAGAGAGCAGCAGGTATTCATCTCGCATGTCCGCAGAAGACCTGAGGAATGCTGATGATGAGATGTCATTCATTGAGCAAAAGTTTATGGATGCCAAACGCCTTGCAACTTACCAGGATTTACAGTCTTCAAAGGATTTCCATGATACACTTGAGGTACTCGACTCTAACAAGGAACTTCTTCTAAAGTACTTTAAACGACCAGATTCTTTGTTTAAAAAGCATCTGAACGATCTTCAAGCTGCTCCTTTCGAATCACATTTGGCTGACACGGAAGCTATGCAATTACCTGAGATTGAGAAGTATGGAAATGAGTTTGACTGGAGGTTAGACACCAACACAGCATGGGTGAATTGTGATAGATCTCATCAAAGGCAGCATGATGGATATCCTCGCCAATTCGACAGAAGACATCTGATGCATAGTTCACCGCGATCATCAAAGCTTCCATTGAAGGGAAAACATGAACAAGGTGCTGCCCCTACAAAGATTGTTGTCCTAAAGCCTAATCTTGGGAAATTCCAGAATACTGCCAGAAATGTTTCTTCACCTTGTTCTCCCCATATTTTTCAGTCAGAGCATGCAAATGATACGGAATTTTCAGATATCCGATTTAGGGACTCCAACATGTATCAGCAAAAGATTAATTTGCCTGATACTGCCAGGCCTTTGAGGCATAATTCTTTGGAATCCAGAGAAATTGCTAAAGAAATAACTCGTCAAATGAAAAGTAGTTTGAACAATGGTGGTTGCGTGATGTCGCCCTCTTATAGAATTAGAGGATATGCTGGGGATGATAGTTCTTGCAGTGCCTCTGGAAATGAATCTACGGAGGAATCAGTGGGAACTCATGCTACTTGGGGAAACTCTTCTGACCTTAATAATTGTAGCAGGAGGTCATCGCATTCTAGTGAATCATCTGTGAGTAGGGAGGCAAAGAAGAGATTATCAGAAAGGTCTACTGTGGAACGACAACGTAATAGACCTGGTGGGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGACGGATGTATTGGGAGTTTGCCAAGGTCAAGATCTCTACCTGCTTCTTCTAATGTCTTTGGAAGTCCTAGAACAATCACACGGAATGAAGCACTTCGTGATGATCGATTTAGAATGCCAAAGGAAGCCATTAAACGGGAGAGGAGAAGAGGAAGGAGCCATGATCAGAGGCATGGTGTGAATAGTAGAAGCACAAGATCTGGTCACAAGAAATCTTGGTCTTTGCATTTGTCCGAGTTGGAAGGTAATGAGTTTTCACCAAGCTTTAATGCCATTCCGAATAAAATGGAAACAAATCTTGAAGAAGGTTCAAAACTAGAGGTTCCTGTCACCGAATCCCTTTCTGCAACCCTCAAGGATACAAGTGCGATTCCTGATACTGTTGCGAGTGTAGCAAATGAAGATGCAGGCAGGTCTTGGGAACCTTCTGATAATGTGCTGCCTGAATCATCTTCTGTTTTGATCAAAGTTGATAATAGTGCTGCTGACAAAGATAATTCAATTCAGCAGGAACTATCTGCTGGGTCTCCTGATGGAAGTTCAGACTGCTTTCAACCACCTGTTCCTAGACTTGAATCTTCATGTGGTAAAGATACTGATCAACCCAGTCCTGTCTCAGTTCTGGAACCTTCTTTTACGGATGATCTATCGTCATCATGCTCTGAGTGTTTTGAAAGTCTCAGTGCTGACTTACAAGGGCTCCGAATGCAGCTCCAGTTGCTGAAGTTGGAATCTGAAGGATATGCAGAGGGATCTGTGCTAATTTCAAGCGATGAAGAGTGTGAGGAAGGTTCTACTAGATTGTCCTCAGAAGACAATCGATTACGTAGAACCGAAGACAGTTGGGAGTCTTCCTACATTATTGATGTGCTGTCTGAATCTGGCATTGATGGAGGTCAAGCTGATCTGAATTTTGAATTTTGGCATTCTCTGGAATGCCCTGTAAGTCTCTCAGTGTTTGATGAACTTGAAAAGAGGTACTGTGATTGGACCACTTGTTTGAGGTCTGAAAGACGGTTGCTTTTTGACCGCATAAATTCTGGAATCGCCAAGATCCACAATCAATCCATGAACTCACAGCCATGGTTGAGCCGTGCAACAACAAATGTGGGTTCTAAACTGATTGAAAATCGGATCGAAGATGGTCTTCTCAGGATGCTGGGAAGCCAGGGAAAAGTGAAGGATGATGCCTTGGGGAAGGTGTTGGTTAAGGAATCACAGTGGTTGGACTTAGGAGATGAAATTGATGTAATAGGTAGGGAAATTGAGAAATTGTTGTTAGAAGAAATAGTAGCAGAGATAGCTGGTGCATAG 2808 0.4327 MEKSRNRKSSVASRNQPHTLVLPQESKQVHRQRQLPDLSPDSVSCGGGVADKDSFSFKFGWRSSKQLFGTPIKKLLADEMLQETESKRRNPGVIARLMGLDGLPANKQQKGSSENHVEKARSRGTPDNGRSSRRSSKDQQEFKDVFEVSEIPMVESSRYSSRMSAEDLRNADDEMSFIEQKFMDAKRLATYQDLQSSKDFHDTLEVLDSNKELLLKYFKRPDSLFKKHLNDLQAAPFESHLADTEAMQLPEIEKYGNEFDWRLDTNTAWVNCDRSHQRQHDGYPRQFDRRHLMHSSPRSSKLPLKGKHEQGAAPTKIVVLKPNLGKFQNTARNVSSPCSPHIFQSEHANDTEFSDIRFRDSNMYQQKINLPDTARPLRHNSLESREIAKEITRQMKSSLNNGGCVMSPSYRIRGYAGDDSSCSASGNESTEESVGTHATWGNSSDLNNCSRRSSHSSESSVSREAKKRLSERSTVERQRNRPGGWVEPLGISSRDGWKDGCIGSLPRSRSLPASSNVFGSPRTITRNEALRDDRFRMPKEAIKRERRRGRSHDQRHGVNSRSTRSGHKKSWSLHLSELEGNEFSPSFNAIPNKMETNLEEGSKLEVPVTESLSATLKDTSAIPDTVASVANEDAGRSWEPSDNVLPESSSVLIKVDNSAADKDNSIQQELSAGSPDGSSDCFQPPVPRLESSCGKDTDQPSPVSVLEPSFTDDLSSSCSECFESLSADLQGLRMQLQLLKLESEGYAEGSVLISSDEECEEGSTRLSSEDNRLRRTEDSWESSYIIDVLSESGIDGGQADLNFEFWHSLECPVSLSVFDELEKRYCDWTTCLRSERRLLFDRINSGIAKIHNQSMNSQPWLSRATTNVGSKLIENRIEDGLLRMLGSQGKVKDDALGKVLVKESQWLDLGDEIDVIGREIEKLLLEEIVAEIAGA 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 417 491 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 1 47 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 505 571 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 10 39 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 420 456 - -
Stsc60659g00001 935 Pfam DUF761-associated sequence motif 84 107 IPR032795 -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 457 478 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 112 141 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 83 141 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 526 547 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 508 523 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 289 311 - -
Stsc60659g00001 935 PANTHER AFADIN 27 933 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 668 709 - -
Stsc60659g00001 935 Pfam Domain of unknown function (DUF4378) 782 931 IPR025486 -
Stsc60659g00001 935 Coils Coil 722 742 - -
Stsc60659g00001 935 MobiDBLite consensus disorder prediction 694 709 - -
Stsc60659g00001 935 Pfam Protein of unknown function (DUF3741) 179 223 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60659g00001 Stsc-Chr60659 10623 15707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60659g00001 69 935 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.461 1.43e-120 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60659g00001 - - ccaj:109788117 1101.27