Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60655g00002 ATGGCTAGGATCAAATTCACCTTCCCATGGTTCGAATGCGGCAGAAATTCTTCTTCCAGTGACAAGAACAACTTGAAAGAACCTCACATGGTGGATGCCGATAACACTACAGCTGAGGTAATGTCCTCAAGAAAGAGGAAGAGACGAAATGCCTTTCTTGAATCAGACGGTTCATCAGGTGATGGAAGGACCGCAGAACGTAACAAGGATAACATGATGATGAATATCAAGAAAACAGAAAGAAGCTGTTTGGTGCAAGAAAATAATCAACATTGTTTCAACGATACTGAATTTGAAGTTGCTGAAATCTTGCATAATCTTGGTACTTTCTTTTTAGAGAGACTTAAGTCAGAGACTTCAAAGAATTCAAGCCCAAGTAATGTGAGTGCATCATCAACAGACAAAGAAAAAGTTTCAAAGAACACTTCCAAGACGACCCTTACACCCCCAAGGGTTTCTCCCATGAGGAGAGAGAGAACGAGAGCAGTTAATCAACCAAGCTCTGAATTGCCAGAAAACTTCAAGAACGTGATAAGAAACATGGGCGGCAGCGAGATCACTTTCGTCATCGAAAAGTCTCTGTGTATGTCGGACTTGAATCGGCAACAAAACCGGCTTTCGATTCCGTCAGCGAAGGTAAAGGATACAAAGTTTTTGCTTAAGGCTGAATTAACAAGCCTAGATGACAAAGGGGAAATCAAAGTGAAATTGATACAACCGTCGCTGGAAATCGGTGAGTTGAGTTTGGTTAAGTGGTTCATGGCCAAGGAGAACGGATCAGTGAGCAGTAGCTTTATTCTGAGGTCGAATTGGATGAATGTTGCAGAGGCTAACAAACTGAAAGAGAATGATGTTGTTCAAGTTTGGTCGTTCCGTGTTGAAGAGAAATTATGCATTGCAATTGTTAAACTTTGA 915 0.4131 MARIKFTFPWFECGRNSSSSDKNNLKEPHMVDADNTTAEVMSSRKRKRRNAFLESDGSSGDGRTAERNKDNMMMNIKKTERSCLVQENNQHCFNDTEFEVAEILHNLGTFFLERLKSETSKNSSPSNVSASSTDKEKVSKNTSKTTLTPPRVSPMRRERTRAVNQPSSELPENFKNVIRNMGGSEITFVIEKSLCMSDLNRQQNRLSIPSAKVKDTKFLLKAELTSLDDKGEIKVKLIQPSLEIGELSLVKWFMAKENGSVSSSFILRSNWMNVAEANKLKENDVVQVWSFRVEEKLCIAIVKL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60655g00002 304 MobiDBLite consensus disorder prediction 37 68 - -
Stsc60655g00002 304 MobiDBLite consensus disorder prediction 117 150 - -
Stsc60655g00002 304 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 64 304 IPR005508 GO:0003677
Stsc60655g00002 304 MobiDBLite consensus disorder prediction 117 167 - -
Stsc60655g00002 304 Pfam B3 domain-containing protein At2g31720-like 170 276 IPR005508 GO:0003677
Stsc60655g00002 304 Gene3D - 186 304 IPR015300 -
Stsc60655g00002 304 SUPERFAMILY DNA-binding pseudobarrel domain 188 300 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60655g00002 Stsc-Chr60655 7967 8881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60655g00002 174 301 B3 DNA Binding Superfamily AT1G05930 23.704 2.16e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60655g00002 - - aip:110269262 259.996