Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60654g00011 ATGGAGAGCGAGTGTGAGATGATGAGAGAAGAGAATCATAGTCATAGTAATAATAATAATGGGGGGTGTTGTGTGTTCAGTGATGATGAGCTTAAGGATGTGAGTGGTGTGAAACGTGTTGGTGGTGACTGTGTTGAAGTCACGTGCGGGTGCACTAGCCATAGATATGGTGATGCTGTTGGAAGGCTTAGGGTTTTCTCTAATGGCTGCCTCCAAATCTCTTGTGAATGCACTCCTGGTTGCAACGAAGACAATATGACTCCTTCTGCATTTGAGAGGCACTCTGGAAGAGAGACAGCGAGGAAATGGAAGAATAATATTTGGGTAATAGTTAATGGTGAGAAGGTTCCATTATTCAAAACAGTTCTACTCAAGTACTATAATAAAGTGTCAAAAGCTGCCAGCAACACCGTGCGCGGTTGCCACCGCGACGAGTTCATCCGGTGCACGGAGTGCAACAAACAGCGCAGGTTCCGGCTGAGGACTAAAGAGGAATGCCGCCTTCACCATGATGCTTTGGCTGATAGTAATTGGAAATGTTCTGATCATCCATATGATAAAATCAAATGTGAGAATGAAGAAGAGAGAGCAAGTAGAAGAGTTTACAGAGGCTGCACACGTTCACCAACATGCAAAGGATGCACAACATGTGTGTGCTTTGGATGTAACATATGCCGTTTTTCAGATTGCAGTTGTCAAACTTGCACTGACTTTACATGGAATGCCAAAGCTGAGTAG 738 0.4431 MESECEMMREENHSHSNNNNGGCCVFSDDELKDVSGVKRVGGDCVEVTCGCTSHRYGDAVGRLRVFSNGCLQISCECTPGCNEDNMTPSAFERHSGRETARKWKNNIWVIVNGEKVPLFKTVLLKYYNKVSKAASNTVRGCHRDEFIRCTECNKQRRFRLRTKEECRLHHDALADSNWKCSDHPYDKIKCENEEERASRRVYRGCTRSPTCKGCTTCVCFGCNICRFSDCSCQTCTDFTWNAKAE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60654g00011 245 Gene3D - 41 142 IPR010919 -
Stsc60654g00011 245 ProSiteProfiles SAND domain profile. 29 118 IPR000770 GO:0003677
Stsc60654g00011 245 PANTHER PROTEIN ULTRAPETALA 1 24 243 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60654g00011 Stsc-Chr60654 59561 62048 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Stsc60654g00011 SAND 2.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60654g00011 - - ahf:112771653 500.745