Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60654g00007 ATGGGCATGCTGGGGAGCGTGTATAGGGCTGAGCTTCCTAATGGGAAGATACTTGCTGTCAAGAAACTAGACAAGAGAGTTTCTGATCACCTGAAGGACGATGAGTTTCTTGAATTGATAAATGGTATTGACAAAATCCGGCATGCAAATATTGTTGAACTCATTGGATACTGTGCAGAGCATGGCCAAAGGCTTCTGATTTATGAGTACTGCAGTAACGGATCGCTCCAGGATGCAATCCATTCAGATGATGAATTTGGAACAAGATTGTCATGGAATACTCGTATTCGGATAGCACTCGGAGCTGCTAGGGCCTTAGAGTATTTGCATGAGCAATGTCAGCCACCAATTGTACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATCTATCCGTCCGGGTCTCTGAATGTGGTTTGGCTCCATTAATAACTTCAGGTTCTGTAAGTCAGCTCTCAGGACAACTGCTAACAGCTTACGGCTACGGGGCTCCAGAATTCGAGTCGGGAATTTACACCTACCAGAGTGATGTATACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACCGGCCGACAGTCCTATGACAGGACGCGCCCTCGAGGGGAGCAGTTTCTGGTGAGATGGGCAATTCCTCAACTTCATGATATTGATTCATTATCAAGGATGGTTGATCCTTCTCTAAATGGAGAATACCCTGCGAAATCATTGTCAAATTTCGCAGACATTATTTCTCGATGTGTTCAATCAGAGCCAGAATTCAGGCCAGCAATGTCAGAGGTTGTCTTGTACTTGCTAAACATGATAAGGAGGGAATCACAGCAATCCGAATCAACCGAAAAATGA 852 0.4413 MGMLGSVYRAELPNGKILAVKKLDKRVSDHLKDDEFLELINGIDKIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDAIHSDDEFGTRLSWNTRIRIALGAARALEYLHEQCQPPIVHRNFKSANILLDDDLSVRVSECGLAPLITSGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRPRGEQFLVRWAIPQLHDIDSLSRMVDPSLNGEYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRESQQSESTEK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60654g00007 283 Pfam Protein tyrosine and serine/threonine kinase 2 265 IPR001245 GO:0004672|GO:0006468
Stsc60654g00007 283 SUPERFAMILY Protein kinase-like (PK-like) 2 267 IPR011009 -
Stsc60654g00007 283 Gene3D Transferase(Phosphotransferase) domain 1 71 283 - -
Stsc60654g00007 283 PANTHER OS01G0253100 PROTEIN 2 275 - -
Stsc60654g00007 283 Gene3D Phosphorylase Kinase; domain 1 1 70 - -
Stsc60654g00007 283 ProSiteProfiles Protein kinase domain profile. 1 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60654g00007 283 PIRSF ILK 3 282 - -
Stsc60654g00007 283 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 71 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60654g00007 Stsc-Chr60654 37692 39226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60654g00007 2 278 Strubbelig Receptor Gene Family AT4G03390 81.588 1.54e-168 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc60654g00007 PK_Tyr_Ser-Thr 2.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60654g00007 - - gmx:100811490 509.99