Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60651g00005 ATGTTCATGTTCATGTTCATCCCTATCACCCATGAATTACAAGAAGCCCAAACCCAAGTCTTGTTTCAGATAAGGAAGCACCTTGAATACCCTACCTCTTTACAGATTTGGAGAAATTACAACTATGACCTTTGTTCCCTTCCTTCATCTTCTCACACTAGCATTAAGTGCGAGGGCAATTCGGTAACTGAGCTCAAAATCATTGGGGACAAGGCTTATAATGTGAGGGTAGACAAAAACAAACACAAAAACAAAAATAACTTGAATGGATTTGCAGTTTCTAATTTAACACTATCCCCAAATTTCTCAGTTGATTCTTTTGTCACCACATTGACAAGGTTAACAAGCTTAAGGGTCCTTAGCTTGGTGTCCTTAGGGATTTGGGGTCCACTTCCTAATAAGATTCATAGGTTATCTCATCTTCAAGTTCTGGACTTAAGCTCAAATTTCTTGTTTGGTTCTTTCCCTCCAAGAATGGTAACAATGGTTAATCTTCATACACTATCACTTGATGGAAATTACTTTAATGCCACCATACCCAATTGGTTTAACTCATTGTCTAATCTTAATGTTTTGACTTTGAAGAACAACCACTTAATTGGCTCATTCCCTTCCTCACTATGCAAAATTAAGTCCCTTAATGTTATTTCCTTGTCCCAAAATGAGTTATCTGGTGAACTACCTGATCTGAGTGCTCTCACTTCCCTTCATGTATTGGATTTGAGAGAGAATCATTTGGATTCTAAGTTACCATTGATGCCTAAAACAGTGGTTACAGTTCTTCTAAGCAAAAACTCGTTCTCAGGTGAGATTCCTAGTGAGTTAGGTGAACTCAAACGGCTTCAGCATCTCGATCTTTCCTCGAATTATCTTAGTAAGATACCTCCAAATGCATTGTTCTCTTTGCCAAATATAAGTTATTTGAATTTGGCTAGTAATGTGCTTAGTGGTTCCCTGCCCAACAAACTAAGGTGTGGCAATAAGCTTGGGTTTGTGGATATTTCTAATAACAAGCTAAATGGTGCACTTCCTTCTTGCTTGGCCGGCACGTCTGACCGACGAGTTGTTACATACGGTGGAAACTGTTTGTCTGCTGATTTCCAGCCTCAGCGGCGAGGGTCTTATTGTAATTCAGGATTGAAGAAGTTCTCGGCATGGGAAATCGCTGCGGCGGTTGGTATCATTTCTGTAGTAGTTCTTGTGATTTTAGCTTCCGGAGTTTTACTCTATAGACAATGTTACTTAAAGGAAACATATGATGAGCATGAAGAGTTGCCAAAAGCTGTCCAAGATTCCTCAACAACAACAGGGGTTTCCACTGAATTCCTTGCCAGTGCTAGATTCATTTCACGGGTAGTGAAGATAGGGACACAAGCGACTCCGTTTTATAGACAGTTTTCAACTGAAGAGTTGAAGGAAGTCACCAAAAATTTTGACTTGTCCACTTATATTGGCGAAGGCTCCATAGGGAAGCTCTACAAAGCTAAACTGGATAATGGATCCTACGCAGTGATACGATCTGTGGCTTTGTTGAAGAAATGCTCGATTCAAAACCTCAAAATTCGGTTGGATTTACTCTCGAAACTTCAACATCCTAACTTGGTTAGCCTATTGGGTTACAGCATTGATGGTGGTGGACAAGATGACTCTAGTATTCCCAAACTTTATCTTGTATATGAGTATGTGCCAAATGGAGATTATCGCAGCCGTCTATCAGAATTTTCACCCGAGAAGCCATTAAAGTGGTCTGATAGATTGGCAATTTTGATTGGAGTTGCCAAGGCAGTCCATCATTTACATACTAGTGTCATACCTGAGATTGAAAAGCCTGAGGCAAAGGAAGAGAATCCATACTCATGTGAAAGGACAAAATTAGATGACGATGTTTATAACTTCGGATTCATACTGTTTGAGTCACTTGTTGGACCCATTGCAAGCGAAAAAGGGGAAGCATTTTTTCTTAATGAAAAGGCATCCTTTGATAGTCATGATGGTAGAAGAAAAATTGTAGATCCAATGGTGTTGACCACTTGCAATCAAGAGTCACTGTCAATTGCAATATCCATCACAACCAAATGCATATCCCCAGAATCCTCATTGCGTCCTTCTTTTGAAGATGTTCTATGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACAGCAGAAGCAGAACAAAGATCTGATTCTACATCATAG 2196 0.398 MFMFMFIPITHELQEAQTQVLFQIRKHLEYPTSLQIWRNYNYDLCSLPSSSHTSIKCEGNSVTELKIIGDKAYNVRVDKNKHKNKNNLNGFAVSNLTLSPNFSVDSFVTTLTRLTSLRVLSLVSLGIWGPLPNKIHRLSHLQVLDLSSNFLFGSFPPRMVTMVNLHTLSLDGNYFNATIPNWFNSLSNLNVLTLKNNHLIGSFPSSLCKIKSLNVISLSQNELSGELPDLSALTSLHVLDLRENHLDSKLPLMPKTVVTVLLSKNSFSGEIPSELGELKRLQHLDLSSNYLSKIPPNALFSLPNISYLNLASNVLSGSLPNKLRCGNKLGFVDISNNKLNGALPSCLAGTSDRRVVTYGGNCLSADFQPQRRGSYCNSGLKKFSAWEIAAAVGIISVVVLVILASGVLLYRQCYLKETYDEHEELPKAVQDSSTTTGVSTEFLASARFISRVVKIGTQATPFYRQFSTEELKEVTKNFDLSTYIGEGSIGKLYKAKLDNGSYAVIRSVALLKKCSIQNLKIRLDLLSKLQHPNLVSLLGYSIDGGGQDDSSIPKLYLVYEYVPNGDYRSRLSEFSPEKPLKWSDRLAILIGVAKAVHHLHTSVIPEIEKPEAKEENPYSCERTKLDDDVYNFGFILFESLVGPIASEKGEAFFLNEKASFDSHDGRRKIVDPMVLTTCNQESLSIAISITTKCISPESSLRPSFEDVLWNLQYAAQVQATAEAEQRSDSTS 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60651g00005 731 ProSiteProfiles Protein kinase domain profile. 478 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60651g00005 731 PANTHER UNNAMED PRODUCT 14 366 - -
Stsc60651g00005 731 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 257 381 - -
Stsc60651g00005 731 Gene3D Ribonuclease Inhibitor 256 381 IPR032675 -
Stsc60651g00005 731 SMART LRR_typ_2 302 326 IPR003591 -
Stsc60651g00005 731 SMART LRR_typ_2 186 210 IPR003591 -
Stsc60651g00005 731 SMART LRR_typ_2 278 301 IPR003591 -
Stsc60651g00005 731 SMART LRR_typ_2 233 256 IPR003591 -
Stsc60651g00005 731 SMART LRR_typ_2 138 162 IPR003591 -
Stsc60651g00005 731 Pfam Protein tyrosine and serine/threonine kinase 480 601 IPR001245 GO:0004672|GO:0006468
Stsc60651g00005 731 SUPERFAMILY Protein kinase-like (PK-like) 460 711 IPR011009 -
Stsc60651g00005 731 ProSiteProfiles Leucine-rich repeat profile. 280 301 IPR001611 GO:0005515
Stsc60651g00005 731 Gene3D Ribonuclease Inhibitor 14 255 IPR032675 -
Stsc60651g00005 731 Gene3D Transferase(Phosphotransferase) domain 1 610 730 - -
Stsc60651g00005 731 Gene3D Transferase(Phosphotransferase) domain 1 454 609 - -
Stsc60651g00005 731 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 14 255 - -
Stsc60651g00005 731 Pfam Leucine Rich Repeat 140 156 IPR001611 GO:0005515
Stsc60651g00005 731 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Stsc60651g00005 731 Pfam Leucine rich repeat 259 315 IPR001611 GO:0005515
Stsc60651g00005 731 SUPERFAMILY L domain-like 92 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60651g00005 Stsc-Chr60651 35278 40195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60651g00005 5 659 Miscellaneous Gene Families AT5G14210 51.216 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Stsc60651g00005 PK_Tyr_Ser-Thr 3.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60651g00005 - - gmx:100813412 992.26