Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60650g00006 ATGATCAAGTGGGGAGGAAGAAAAGCTTCTTCAGCTTCATCTTCTGCTTCTTCTTCTTCTTCTCCTTCTGTGCCTTCTTCAAATCTCCATGCTTCTCCTTTTTCTTGGTTCTCTAAGTTCAAGCACATGAGAATCAACTCATCATCATCAGACTCAACAACTACTCATGCAAATTCCAAGAAGCACAAGCCACCAAAGCAGACTACTTCTTCTACTGTTTCACCGCCACGGTATTCTTGTGGGAATAATAATAAATATGGTGGTGGTGATGATGCTTCTTCTTCTTCTCCATGGAGATCTTCATTTGGTGAACAGTTTGAGTTTCACGATGAAGATAATGCTATTGAATCTTCAGGTTTCCCTGGTAGTAGTACTAGTGCTAAGAAGAATGCATCAAGAGAAGGCACTCTCATCAACAACAACATCAAGTTGAAGGAGAAAAAGGAGAAGAGTGGCTGTGGTGTTATTATTCCAAAGGAAGAAAGAAAATTTGTGGATGATAGGAAGGTTATTAAATTGGAGATGCAAGAGCACACTAGAGAAGAAAGGGAATATGAAAACCTAAGGAGCAGATTTGAGAAGAAAGCTCAAAAGGTTTTGCAAGAACAGCTCCTCAATTTAGAAAGAGAAAGAGAATCATCAAGAAAATTAATACAAGAGAAAGATTTGCAGATGCATTTGGAAGAATCACCAAGACCAATATGCACACCAAGAGCACATTATTCATTCCCATCTTCATCTGAATCCAAGAAGAGTTCCAATTCTCTTAGAACTAGTAACAATAAGAATAATATTGTGGAGAAGAAACTGATGAATCCTACTGAGGAGTTGAACTCGAACTTGAAGGTGAAGACCAAGAAAAAGAAGCAACAAACATTAGTTGATGGCAGCAGCAGAGAAACTATTCATCAGAGGAGGAAATCAAAGCATAGCCCCAGAATCAGAATACATTCTCCAAGGATGTCTTCTCCGAGGGTTGATCAAGTTTGCAGAATAAAGGCTATAGAAGACATGAAGAAAGCAAGATTGAAGATGAAGAAAGAAAGAGAGGAGATTGTTTTGCAGGAAACACTACTACCACTCCCAAAAGGCTCATCATCAGAAGATAGATTTGCTGTTATTAAATGTTCATTGGATCCAAGACAAGATTTTAGAGACTCTATGATTGAGATGATCATTGAGAAGCGGATCAGAAACCCAGAAGAAATGGAGGAGCTTCTGGCATGTTATCTAACATTGAATGCTGATGAATATCATGATCTCATCATTCAAGTCTTCAGGCAAGTTTGGTTTCAAATGAGCCATGGTGATTAA 1314 0.3843 MIKWGGRKASSASSSASSSSSPSVPSSNLHASPFSWFSKFKHMRINSSSSDSTTTHANSKKHKPPKQTTSSTVSPPRYSCGNNNKYGGGDDASSSSPWRSSFGEQFEFHDEDNAIESSGFPGSSTSAKKNASREGTLINNNIKLKEKKEKSGCGVIIPKEERKFVDDRKVIKLEMQEHTREEREYENLRSRFEKKAQKVLQEQLLNLERERESSRKLIQEKDLQMHLEESPRPICTPRAHYSFPSSSESKKSSNSLRTSNNKNNIVEKKLMNPTEELNSNLKVKTKKKKQQTLVDGSSRETIHQRRKSKHSPRIRIHSPRMSSPRVDQVCRIKAIEDMKKARLKMKKEREEIVLQETLLPLPKGSSSEDRFAVIKCSLDPRQDFRDSMIEMIIEKRIRNPEEMEELLACYLTLNADEYHDLIIQVFRQVWFQMSHGD 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60650g00006 437 Coils Coil 168 224 - -
Stsc60650g00006 437 MobiDBLite consensus disorder prediction 64 102 - -
Stsc60650g00006 437 MobiDBLite consensus disorder prediction 46 132 - -
Stsc60650g00006 437 MobiDBLite consensus disorder prediction 219 268 - -
Stsc60650g00006 437 NCBIfam uncharacterized plant-specific domain TIGR01568 372 433 IPR006458 -
Stsc60650g00006 437 MobiDBLite consensus disorder prediction 1 29 - -
Stsc60650g00006 437 Coils Coil 331 351 - -
Stsc60650g00006 437 MobiDBLite consensus disorder prediction 240 268 - -
Stsc60650g00006 437 MobiDBLite consensus disorder prediction 282 302 - -
Stsc60650g00006 437 MobiDBLite consensus disorder prediction 282 322 - -
Stsc60650g00006 437 Pfam Transcriptional repressor, ovate 377 433 IPR006458 -
Stsc60650g00006 437 MobiDBLite consensus disorder prediction 117 132 - -
Stsc60650g00006 437 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 219 434 IPR038933 GO:0045892
Stsc60650g00006 437 MobiDBLite consensus disorder prediction 8 29 - -
Stsc60650g00006 437 ProSiteProfiles OVATE domain profile. 373 432 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60650g00006 Stsc-Chr60650 33457 34770 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc60650g00006 Ovate 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60650g00006 - - ahf:112783885 466.077