Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60648g00009 ATGGCAGCAAGCACAACTAGCATTCCATCTCACATAAAGGCTTGGGTGTACAATGAATATGGGAACATTGAAGACACTCTCAAGCTTGACTCCAACATAGCCATACCAGAAATCAAGGATGACCAGGTTCTCATCAAGGTTCTGGCTGCTGCCCTTAACCCTATTGATTATAAAAGGGCACTTGGGTTTTTCAAGGACTCTGACTCTCCATTCCCAACTGCTCCAGGGTATGATGTTGCTGGTGTGGTGGTGAAAGTGGGAAGCCAAGTAAAGAAATTCAAGGTTGGAGATGAAGTTTATGGTGACATAAATGAGTATGCAGTGAATAATCCAAAAGCTATTGGGTCAGTGGCAGAGTATACAACTGCTGAAGAGAAAGTGTTGGCTCACAAACCCTCTAATTTGAGCTTTGTTGAAGCTGCTAGCCTACCTGCAGCAATCATCACTGCTTATCAAGGTCTTGAGAGAGTTCAATTTTCTGCTGGTAAATCTATTCTTGTTCTTGGAGGTGCTGGTGGAGTTGGTACCCTTGTTATTCAGCTAGCAAAGCAAGTTTTTGGTGCAGCTAAGGTAGCAGCTACCGCTAGTACTGGAAAACTGGAGCTGTTAAGGAAGTTAGGAGTAGACTTACCTATCGATTATACAAAAGAGAATTTTGAGGAGCTCCCAGAAAAGTTTGATTTTGTCTATGATACAGTAGGAGAAACAGAGAAGGCATTGAAGGCAATTAAAGAAGAAGGTCAAGTAATAACAATTGCAGGACCTGCAATTCCACCTGCAATATTTCTATTTGTCCATTCAGATGGTGGTGTGTTAGAGAAACTGAAACCTTATTTAGAGAGTCGCAAGGTGAAGCCAGTGTTGGCTCCAGAGAGCCCTTTGCCATTTTCTAAGGTAATAGAAGCATTTTCCTACCTCAAGACCAATAGGGCCATTGGAAAACTAGTTATACATCCAATCCCATAA 966 0.4213 MAASTTSIPSHIKAWVYNEYGNIEDTLKLDSNIAIPEIKDDQVLIKVLAAALNPIDYKRALGFFKDSDSPFPTAPGYDVAGVVVKVGSQVKKFKVGDEVYGDINEYAVNNPKAIGSVAEYTTAEEKVLAHKPSNLSFVEAASLPAAIITAYQGLERVQFSAGKSILVLGGAGGVGTLVIQLAKQVFGAAKVAATASTGKLELLRKLGVDLPIDYTKENFEELPEKFDFVYDTVGETEKALKAIKEEGQVITIAGPAIPPAIFLFVHSDGGVLEKLKPYLESRKVKPVLAPESPLPFSKVIEAFSYLKTNRAIGKLVIHPIP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60648g00009 321 Pfam Zinc-binding dehydrogenase 206 317 - -
Stsc60648g00009 321 CDD MDR_like_2 13 317 - -
Stsc60648g00009 321 Gene3D - 154 268 - -
Stsc60648g00009 321 Gene3D - 19 317 - -
Stsc60648g00009 321 SMART PKS_ER_names_mod 21 317 IPR020843 GO:0016491
Stsc60648g00009 321 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 162 183 IPR002364 GO:0008270|GO:0016491
Stsc60648g00009 321 SUPERFAMILY GroES-like 9 167 IPR011032 -
Stsc60648g00009 321 Pfam Alcohol dehydrogenase GroES-like domain 41 102 IPR013154 -
Stsc60648g00009 321 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 321 IPR044626 GO:0016628
Stsc60648g00009 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 135 260 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60648g00009 Stsc-Chr60648 32492 36482 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60648g00009 65 232 Monolignol Biosynthesis Gene Families AT1G72680 27.179 1.15e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60648g00009 K18980 - gmx:100791274 485.337