Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60641g00009 | ATGATAGCTGTCATTGGAGCCATTCACACAACCACTTTGGCCAAGCTCTCTGCTAAAAGCCAAGAAGCTCTTTCTCAAGCTGGGAACATTGTTGAACAGACTGTTGTTCAAATGAAAGTGGTTTTGGCATTTGTTGATGAGAATAGAGCACTGCAAGGTTACTCATCTGCATTGAGGATTGCTCAGAAGCTTGGATACAAAACTGGATTTGTAAAGGGAATGGGATTGGGTGCCACTTTGTTGTTTTCTGCTGCTATGCTCTTTTGCTTTGTTTGA | 276 | 0.4203 | MIAVIGAIHTTTLAKLSAKSQEALSQAGNIVEQTVVQMKVVLAFVDENRALQGYSSALRIAQKLGYKTGFVKGMGLGATLLFSAAMLFCFV | 91 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60641g00009 | 91 | SUPERFAMILY | ABC transporter transmembrane region | 2 | 88 | IPR036640 | GO:0005524|GO:0016020 | |
Stsc60641g00009 | 91 | Gene3D | ABC transporter type 1, transmembrane domain | 1 | 91 | IPR036640 | GO:0005524|GO:0016020 | |
Stsc60641g00009 | 91 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 1 | 91 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Stsc60641g00009 | 91 | PANTHER | ABC TRANSPORTER B FAMILY | 2 | 86 | IPR039421 | - | |
Stsc60641g00009 | 91 | Pfam | ABC transporter transmembrane region | 2 | 88 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60641g00009 | Stsc-Chr60641 | 30262 | 31058 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60641g00009 | 1 | 89 | Calmodulin-binding Proteins | AT2G36910 | 74.157 | 1.46e-37 | 130 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60641g00009 | K05658 | - | gmx:100777382 | 135.191 |