Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60640g00009 ATGGCAAGGGCAAGGGATAGAACCGAGGATTTCAAAGATGCTGTGCGACACAGTGCTCGATCTTTGGGGTATGATGAGGCTAAGTTGGCATCAGTTATGGCTTCTTTCATTATTCATAAACCTCCTCAAAGGTCGCCATTTTCAAAAGCTGCACTGAAGACGCTCGAGAGTATTGGAGAACTAGAAGAATTTTTGTCGAAGCATAGAAAGGACTATATGGATCTCCACCGCACAACTGAAAAGGAGAGAGATAGCATTGAGCATGAAGTTAGTGCTTTCATTAAAACTTGTCAGGAACAAATTGATGTTCTAAAGAATAGCATAAATCAAGAAGAGGAAACTTCAAAAGGATGGCTTGGAATTGCAACTTCAAAGGCTAATGCTGACACCATTGCCCACAAACATGGGTTGGTTCTAATCTTAAGTGAGAAACTCCATTCAGTATCAGCTCAGTTTGATAAGCTCCGAGCTGTTCGTTTCCAAGATGCCATTAATCGAGCAATGCCACGAAAAAAACTTAATCGCATAACCAAGAAAGGTTCTATTGAAACCCCTAAATCAGATGATTTGGAGCTCAGAGAACCCAGTGAGTTACACAGTGAGCCTCTAAGAGTCCAACAACAGCTATTGGATGATGAAACACGTGCACTTCAGGTGGAATTGTCTAATATGCTAGATACAGTTCAACAAACCGAAACTAAGATGGTGGAAATGTCTGCATTAAATCACCTTGTATCTACACACGTTTTGCACCAAGCTCAGCAAATTGAGCATCTGTATGAGCAGGCTGTTGAAGCTACAAAGAATGTTGAGCTTGGCAACAAAGAACTTTCCCAAGCCATTCAGCGGAATAGCAGCAGCAGAACATTTCTTATACTTTTTCTATTTGTGCTTACATTTTCAGTTCTCTTTCTTGATTGGTACAGTTAA 930 0.4065 MARARDRTEDFKDAVRHSARSLGYDEAKLASVMASFIIHKPPQRSPFSKAALKTLESIGELEEFLSKHRKDYMDLHRTTEKERDSIEHEVSAFIKTCQEQIDVLKNSINQEEETSKGWLGIATSKANADTIAHKHGLVLILSEKLHSVSAQFDKLRAVRFQDAINRAMPRKKLNRITKKGSIETPKSDDLELREPSELHSEPLRVQQQLLDDETRALQVELSNMLDTVQQTETKMVEMSALNHLVSTHVLHQAQQIEHLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLILFLFVLTFSVLFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60640g00009 309 MobiDBLite consensus disorder prediction 176 195 - -
Stsc60640g00009 309 Gene3D - 211 306 - -
Stsc60640g00009 309 Coils Coil 94 114 - -
Stsc60640g00009 309 MobiDBLite consensus disorder prediction 175 195 - -
Stsc60640g00009 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Stsc60640g00009 309 SUPERFAMILY t-snare proteins 55 273 IPR010989 GO:0016020|GO:0016192
Stsc60640g00009 309 PANTHER SYNTAXIN-18 1 309 - -
Stsc60640g00009 309 FunFam Syntaxin-81 like 212 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60640g00009 Stsc-Chr60640 54001 57333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60640g00009 67 309 SNARE and Associated Proteins AT1G51740 72.951 2.62e-111 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60640g00009 K08492 - gmx:100778011 532.717