Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60640g00001 ATGGGGCGAAAATCCTCCGCCGCAGGGTATGGGACGGGACGACTAGAGATTTTGGAAGCGGGAAGGCATCCCCGCCTGGCCCCATTGACACCGTTAATTCGTATTTTCAATGTTTTTCGTGCCGAAAGTATTTTCCATGCTACATATTATCTCCAGGGATATCTGAACTGGTGTGTGCACCTTCAAGTGATGAAGCCCCAATCTGACAACCACTCTACAGAACCCAGGAATCTGGGTCATTCATCAAGTGCCAAGTTCAGTGGAATCAATTTTGGTGAGGTTGAAGCCAAGCACCGAATGCTTTTGATCCAGTGGCTAAATAGTCTTCTTCCGACGTTGAACTTACCGATGAATATCACAGATGATGAGTTAAGAGTATGCTTGAGCAACGGTACAATTTTATGCCAAGTAATGAATAAGCTACGACCTGGTTCTGTAAGTGAGGTCAGTGAATTTGATGATTCTCCGTCAGCAAAGTCAGAGAATGTTAAGAGGTTCTTAAAAGCCATAGATGCATTGGGCATGCCCAAGTTTGAACTATCAGACCTAGAGAAGGGCCCTATGAAGAATGTTGTAGATTGTCTTTTAACACTTAGAGCGAAAAGTTTACAGAATGCTTGGGGAGACAATATTTCTATGACTAGTTCTAAAGTCAGATCAATCACAAGTTCACCTTCATCACATTCAAAGTTCCAAAGTGTTCTGCGTAGTCCGGTTATGGCCGAGCCATCGGCTGCATTATTACACCATGTAGGTCATAAATTTCACGAAGTGTTTCAAATGAAACAGGGAAGCTATGCTGAACTTCCTGCTGCAAAAATCTCAGAACTGATGAAATCTACCAGTTTAAACAATGCTCCTACTCAATCGCTTTTGAGTGTTGTGAATGCTATTTTGGAAGAAAGTGTTGAAAGAAGAAATAGTGAAATACCTCATCGCGTGGCCGTCTTGTTGAGAAAAGTTGTCCAGGAAATTGAGCGGCGTATATCGACTCAAGCAGATCATTTAAGAACACAAAACAATCTTTTTAAGGCTCGTGAAGAAAAATATCAATCAAGAATTAGAGTACTTGAGGTGCTTGCTTCTGGAGCAAAGGATGAAAGTGAGGGTGCGGTTCGAAGCCCAATGCGGAAACAGCAACAGACTACAGTTGCAAATGCAATCATTCAACCAAAGGAATTGACTGAGGTGACTAAAATGGAAGAAAAGAAGGCATTTGAATCTATACAGGGTGAAAAGGCTAAAGAGGAGACAGAGAAGGAAGATAACCAAGAGTTGGAAGCAGAAATCAAGGGTGCCAAAGAAGAACTGAAAGAGAAGTCACAAGAATATGAGCATCAGTTGGAAACATTAAATAATAAGGTTAGAGAGAATGAGGCCTCTTACGAGTCTAAATATCAAAAGTGGAACATGAAAGTTATCCAATTGCAGAAAGCTACAACCTTTCAGCTTAGTTCAATAAAGGTCTTGAAATTGTCTTCGGAAACTGTTAAGCAACATGTGCTTAATGAGCAAACGTTTTATGCAGAAGAGTTTAAGCGATTAGGTGTAAATCTTAAACCACTAGTAGACGCAGCTGAGAATTATCAGGTAGTTCTTGCAGAAAATAGAAAGCTGTTTAATGACATTCAAGAATTAAAAGGAAATATTAGAGTATATTGCAGAGTTAGACCATTTCTCCCAGGACAGAAGGAGAAACAATCTATTGTGGAAAACTATGCTGAAACTGAAATGGTTGTGGCAAATCCTGCCAAACCAGGGAAAGATGGCCTTAGAAGTTTTAAGTTTAACAGGGTGTTTGGTCCAACTGCAACTCAAG 1819 0.4057 MGRKSSAAGYGTGRLEILEAGRHPRLAPLTPLIRIFNVFRAESIFHATYYLQGYLNWCVHLQVMKPQSDNHSTEPRNLGHSSSAKFSGINFGEVEAKHRMLLIQWLNSLLPTLNLPMNITDDELRVCLSNGTILCQVMNKLRPGSVSEVSEFDDSPSAKSENVKRFLKAIDALGMPKFELSDLEKGPMKNVVDCLLTLRAKSLQNAWGDNISMTSSKVRSITSSPSSHSKFQSVLRSPVMAEPSAALLHHVGHKFHEVFQMKQGSYAELPAAKISELMKSTSLNNAPTQSLLSVVNAILEESVERRNSEIPHRVAVLLRKVVQEIERRISTQADHLRTQNNLFKAREEKYQSRIRVLEVLASGAKDESEGAVRSPMRKQQQTTVANAIIQPKELTEVTKMEEKKAFESIQGEKAKEETEKEDNQELEAEIKGAKEELKEKSQEYEHQLETLNNKVRENEASYESKYQKWNMKVIQLQKATTFQLSSIKVLKLSSETVKQHVLNEQTFYAEEFKRLGVNLKPLVDAAENYQVVLAENRKLFNDIQELKGNIRVYCRVRPFLPGQKEKQSIVENYAETEMVVANPAKPGKDGLRSFKFNRVFGPTATQ 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60640g00001 606 Pfam Calponin homology (CH) domain 99 199 IPR001715 GO:0005515
Stsc60640g00001 606 PANTHER KINESIN-LIKE PROTEIN KLP-3 385 606 IPR027640 GO:0003777|GO:0007018
Stsc60640g00001 606 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 93 205 - -
Stsc60640g00001 606 SUPERFAMILY Calponin-homology domain, CH-domain 97 199 IPR036872 -
Stsc60640g00001 606 Pfam Microtubule binding 535 606 IPR031852 GO:0008017
Stsc60640g00001 606 Coils Coil 409 461 - -
Stsc60640g00001 606 Gene3D - 95 210 IPR036872 -
Stsc60640g00001 606 SMART ch_5 98 201 IPR001715 GO:0005515
Stsc60640g00001 606 Gene3D Kinesin motor domain 492 606 IPR036961 -
Stsc60640g00001 606 ProSiteProfiles Calponin homology (CH) domain profile. 96 203 IPR001715 GO:0005515
Stsc60640g00001 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 606 IPR027417 -
Stsc60640g00001 606 ProSiteProfiles Kinesin motor domain profile. 549 606 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60640g00001 Stsc-Chr60640 7018 12927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60640g00001 434 606 Calmodulin-binding Proteins AT5G65930 30.682 2.60e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60640g00001 K10406 - qsa:O6P43_008574 583.948