Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60638g00007 ATGGCAGAAGAAGCTAAGTTGTTTAGCTATCCTTTTCCAGAGTATAAAATTGGGAGGACTGACAATGAAATCAAGAATCTGTGGAATTCATGCTTGAAGAAGAAGCTGAGGCAAAGAGGCATAGACCCTGGTTCCTTTTGCTATAAGCGAGAATCTCTTCATCAAGATACGAATGTTCCGAGTGGCAACAACAACAACAACAACCTTTTGAATATGAAGAACACTACCACCATGGTTTCTTCTTCATGGGGGTTGGTGACAGATTGCAACAGTGTTTCCCCAAGAAAGGAGGCTCATCAAATTCATCTGATGGAAGCAGAAAAGGCAAAGTGGTGTGAGTGTCTTCAAAATCCCATATTGATGCTTGCAACTGTTCAGAACAACCAAGCTTCTTTATCTCTTACCAATTGTAACCCCGATATTTCACAGCCAACCGCAGTCTTGTTTTCAATTCCTAGGGAGAATGACCCGAGCGCAATACTCTCGGTTTCTTTTCATTGCATCTTTGTGACACCTTTTCTAAATCTCGATCCGCTCCTCGACGCACCAGTTGGGACTATACTTACAAAGGAGTTTTCATTAACTTGA 588 0.4184 MAEEAKLFSYPFPEYKIGRTDNEIKNLWNSCLKKKLRQRGIDPGSFCYKRESLHQDTNVPSGNNNNNNLLNMKNTTTMVSSSWGLVTDCNSVSPRKEAHQIHLMEAEKAKWCECLQNPILMLATVQNNQASLSLTNCNPDISQPTAVLFSIPRENDPSAILSVSFHCIFVTPFLNLDPLLDAPVGTILTKEFSLT 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60638g00007 195 PANTHER MYB DOMAIN PROTEIN 55 18 98 - -
Stsc60638g00007 195 Gene3D - 13 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60638g00007 Stsc-Chr60638 45355 47277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60638g00007 18 43 MYB Transcription Factor Family AT4G01680 96.154 1.99e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60638g00007 K09422 - cit:102609163 69.3218