Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60636g00001 ATGTTCTGCACTTCACAATCACAATCACACTCTTCCACTGTTTCATACCTCATCAATAACCTTGCCTTCACCCCACAAGCTGCTCTAACTCTAACCACTTCAAAACGGTTTCGTTTCAATGACCCACACAAAGCAGACACAGTCCTCGCACTCTTCAAAACCCATGGATTCTCCAATTCCCAAATTGCTACCATTGTTACCAAGCTACCCGCAATACTTGCATCTAATCCACAAAGGATGCTGCCAAAGTTCCAATTTTTAGCCTCCAATGGTGCTTCCACCCATGACATTGTTCTTCTAACAACTAGGCACCCTAAATTCTTGCATTCTAGCCTCAAGAACCGCATAATCCCTACTTATGGATTGCTCAAAGCCTTGTTTCGATCCGGTGAGAAAGCGCTCAGCTGCATTGTTTCTTGCCCTGCCTCGTTAATGGATTCTCGCTTGCCAAAAAACATCAAGTTGTTGGCTGATGCCGGAGTCTCCGACTCCGCCATCTACCATTTGTGTCGTACCAGAACGTCTGTGCTCATGTCTTCTGACTTGGGGAAGCCTGTGGACGAAACTCTGCCGAAATCGCTGTGGGACGCCAAAGTTGATGTCCTGAAGAGATGGGGTTGGTCTGAAGAAACACTGTCCGAAGCATTCAGGAGGAACCCTTTATATATGCTCTCATCTAAGGATAAGCTTAATGAGGTGATGAAACTTTGGGTTAATCAATTAGGTTGGGATCCTTTGGCTCTTGCCAGGATGCCATGGCTTTTTGGATGTAATTTGGAGAGAAGGATCATTCTGAGGGCTTTCGTTCTCCAGCATTTACTTGCAAAAGGTTTGATAAAGAAGAACAACAATTGGGGTACGCGTTTCTTATTCCGAAAGACATGTTCCTTAAGAAGTTCGTCGAATGTTTTACAAAAGAGAAGTGTCAACTACTGA 936 0.4455 MFCTSQSQSHSSTVSYLINNLAFTPQAALTLTTSKRFRFNDPHKADTVLALFKTHGFSNSQIATIVTKLPAILASNPQRMLPKFQFLASNGASTHDIVLLTTRHPKFLHSSLKNRIIPTYGLLKALFRSGEKALSCIVSCPASLMDSRLPKNIKLLADAGVSDSAIYHLCRTRTSVLMSSDLGKPVDETLPKSLWDAKVDVLKRWGWSEETLSEAFRRNPLYMLSSKDKLNEVMKLWVNQLGWDPLALARMPWLFGCNLERRIILRAFVLQHLLAKGLIKKNNNWGTRFLFRKTCSLRSSSNVLQKRSVNY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60636g00001 311 SMART mt_12 63 93 IPR003690 GO:0003690|GO:0006355
Stsc60636g00001 311 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Stsc60636g00001 311 SMART mt_12 213 244 IPR003690 GO:0003690|GO:0006355
Stsc60636g00001 311 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Stsc60636g00001 311 PANTHER CGI-12 PROTEIN-RELATED 9 299 IPR003690 GO:0003690|GO:0006355
Stsc60636g00001 311 Gene3D Transcription termination factor 3, mitochondrial 12 185 IPR038538 -
Stsc60636g00001 311 Gene3D Transcription termination factor 3, mitochondrial 189 303 IPR038538 -
Stsc60636g00001 311 Pfam mTERF 49 233 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60636g00001 Stsc-Chr60636 3419 4417 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc60636g00001 mTERF 2.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60636g00001 K15031 - gmx:102666739 255.758