Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60633g00007 ATGGCAGATTTGAAGTTACATGGATTTTGGTATAGTCCCTTTACTATGAGGGTGATATGGACCCTTAAATTGAAGGGTATATCATATGAGAACATTGAGGAAGATCGCTACAATAAGAGTCCTCAACTTCTTGAATACAACCCTGTGCACAAGAAGACCCCAGTGCTTGTTCATGGTGGAAAACCCATTTGTGAGTCCATGATCATTGTTGAATACATTGATGAGTTATGGCCACAAAATCCATTGGTTCCTCATGATCCCTATCAGAGAGCTCAAGCAAGGTTTTGGGTTGCATATGCTGATCAATTCTTTCCTGCAGTTATTCCACTGATTTATGTGGACATTGCTGATGATGAAGAAAAGGAGAAGGCAATAGAAAAGGTCCAGAAACTTCTAAGAGATGTTGAAGATCAATGCTCATTATTGGTTGATGACAAAAAATTCTTTGGTGGTGACAATATCAATATAGTGGACATAGCTATTGGATCAATGATCAAATTTCTTGTAACCATGGAAGATTTGAACCAATTGAAGGTTCTAGAAGCTGAGAAATTCCCTCGTGTACATTCATGGTTTGAAAATTTCAAGAATGCCCCAATCATCAAAGAAAACCTCCCTGAAAGGGAGAAGATGTGTGCTATTATGAGGTATATTAGAGAAAGGAAAAGAGAATCTGAATCATCTACCTAG 690 0.3797 MADLKLHGFWYSPFTMRVIWTLKLKGISYENIEEDRYNKSPQLLEYNPVHKKTPVLVHGGKPICESMIIVEYIDELWPQNPLVPHDPYQRAQARFWVAYADQFFPAVIPLIYVDIADDEEKEKAIEKVQKLLRDVEDQCSLLVDDKKFFGGDNINIVDIAIGSMIKFLVTMEDLNQLKVLEAEKFPRVHSWFENFKNAPIIKENLPEREKMCAIMRYIRERKRESESST 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60633g00007 229 FunFam Glutathione S-transferase U9 83 225 - -
Stsc60633g00007 229 CDD GST_C_Tau 87 218 IPR045074 GO:0004364|GO:0006749
Stsc60633g00007 229 SFLD Main.3: Omega- and Tau-like 1 225 IPR045073 -
Stsc60633g00007 229 CDD GST_N_Tau 4 77 - -
Stsc60633g00007 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Stsc60633g00007 229 Gene3D - 83 226 - -
Stsc60633g00007 229 Gene3D Glutaredoxin 1 82 - -
Stsc60633g00007 229 FunFam Glutathione S-transferase GSTU6 1 84 - -
Stsc60633g00007 229 SUPERFAMILY GST C-terminal domain-like 75 220 IPR036282 -
Stsc60633g00007 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Stsc60633g00007 229 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Stsc60633g00007 229 Pfam Glutathione S-transferase, C-terminal domain 110 198 IPR004046 -
Stsc60633g00007 229 Coils Coil 118 138 - -
Stsc60633g00007 229 SFLD Glutathione Transferase (cytosolic) 1 225 IPR040079 -
Stsc60633g00007 229 PRINTS Omega-class glutathione S-transferase signature 148 167 IPR005442 GO:0004364|GO:0005737
Stsc60633g00007 229 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Stsc60633g00007 229 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Stsc60633g00007 229 SUPERFAMILY Thioredoxin-like 3 104 IPR036249 -
Stsc60633g00007 229 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 211 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60633g00007 Stsc-Chr60633 42656 44140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60633g00007 3 225 Glutathione S-transferase Gene Family AT2G29450 43.556 4.08e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60633g00007 K00799 - gmx:547584 298.901