Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60632g00010 ATGAAGAACTCTGCTTCAGATCGCAGTTTCTACCTTGAGAGCGAAGACGAAGATGAGGAGAAGGATTTGAACAATGTAGATCAAGGAAACGATTCAGACGATTCCAATGAATGGAGTGAGAACGATCCAACGAGAAAACCCAGTTCATACAGCATGGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTGTTAGGTAGTGTACCATCACCAAATATTGAATTCTTGGGCACTACCTCCCTATCAAGATTAGGAAGTTCTTTTATTGTTCCACCTTTGGTAAAGAGACAACCCCCAGTTCCAGATACAACTCCATCAGCAAAGAAACCTCTGCTGCAACCAACGGAAATTGATGAACAGCGGCGTAGCTCCCGTTTTCTGTTGAGGAGGGGTTCTACTAGGAAGGAGGTTTCCAAGGTTGGTCATGAAGTTCACTTTTCAGGCCAATGCACTTTTGGTCAAGCTGTGCTTAATGGCATAAATGCTCTTTGTGGTGTTGGAATCCTCTCTACCCCTTATGCCCTCAGAGAAGGTGGATGGGCTGCACTCTCAGTCTTGTTCATATTTTCAATTTTCAGCTTCTATACTGGGTTGCTGTTACGTCACTGCTTGGATAGTGAACCTGGGCTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTTCTAGTGGACGTATTTTCATTTCAGTAATATTATACACGGAATTATATGCTTGTTGCATAGAGTATATAATTTTGGAGAGCGATAACTTATCTTCATTATTTCCAAATGCGCACCTAAGTTTGGGTGGACTTGACTTGAATCCTCATGTTCTATTTGCAATTGTGACCACCTTGGCTATTCTTCCTACGGTTTATCTTCGTGATTTGCGCATTCTGAGTTACCTCTCAGCATGTGGAGTTCTTGCAACAACTTTAGTGGTTCTCTGCCTTTTTTGGGTTGGCGTAGTAGACAACGTTGGCATTCACAGCAAAGGAACAACAATCAATCTCACAACTTTTCCAGTTGCTATGGGTCTTTATGGTTACTGCTACTCAGGACATGCTGTGTTCCCGAACTTGTATACAGCCATGGCAAACAGAAATCAATTCCCTGGAGTGCTTTTAGTATGTTTTGCACTCTGTACAGCTATGTATGCAGCAGTAGCTGTTATGGGATACACAATGTTTGGAGAATATACGCTGTCTCAATACACTCTTAACATGCCTCAAGACTTAGTTGCCACCAAACTTGCTATATGGACAACGGTGGTGAATCCGTTTACCAAATATCCTTTTTTGCATCACATGATCACAGTAACAAAGCATGCATTTAGAAACAAACATAAAGAGACGCGTCTTTCCAGCCTGGCTTCCTACCCCACTCCAACTAAATTAAAACGAAATACCCAAAATACCCCTAAACCTTCACAAAAACACACACTACCTTTTCTTTCACACTGA 1446 0.4225 MKNSASDRSFYLESEDEDEEKDLNNVDQGNDSDDSNEWSENDPTRKPSSYSMAWPQSYRQSIDLLGSVPSPNIEFLGTTSLSRLGSSFIVPPLVKRQPPVPDTTPSAKKPLLQPTEIDEQRRSSRFLLRRGSTRKEVSKVGHEVHFSGQCTFGQAVLNGINALCGVGILSTPYALREGGWAALSVLFIFSIFSFYTGLLLRHCLDSEPGLETYPDIGQAAFGSSGRIFISVILYTELYACCIEYIILESDNLSSLFPNAHLSLGGLDLNPHVLFAIVTTLAILPTVYLRDLRILSYLSACGVLATTLVVLCLFWVGVVDNVGIHSKGTTINLTTFPVAMGLYGYCYSGHAVFPNLYTAMANRNQFPGVLLVCFALCTAMYAAVAVMGYTMFGEYTLSQYTLNMPQDLVATKLAIWTTVVNPFTKYPFLHHMITVTKHAFRNKHKETRLSSLASYPTPTKLKRNTQNTPKPSQKHTLPFLSH 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60632g00010 481 PANTHER OS05G0424000 PROTEIN-RELATED 158 426 - -
Stsc60632g00010 481 MobiDBLite consensus disorder prediction 450 481 - -
Stsc60632g00010 481 Pfam Transmembrane amino acid transporter protein 150 432 IPR013057 -
Stsc60632g00010 481 MobiDBLite consensus disorder prediction 1 52 - -
Stsc60632g00010 481 MobiDBLite consensus disorder prediction 95 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60632g00010 Stsc-Chr60632 49333 59118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60632g00010 1 425 Amino Acid or Auxin Permease AAAP Family AT2G39130 64.612 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60632g00010 K15015 - gmx:100781123 597.045