Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60630g00002 ATGTCAGAAGTTGAGCTGCTCAGAAATGCTAGGCATGAAAATTTGATAGAGCTATTGGGTTCGTGCATACGAGAAAGTCAATTGCTCATTGTGTATGAACATACATGCAATGGTTCGCTTGATCACCACTTATCAAGAGCAAGTAGCAGATCATTAACATGGACAGAAAGAATGAAAGTCGCAACAGGTGTTGCGAAAGGTCTTAAGTATCTACACGAGAATAACATAATTCATGGAAGGATAAAGCCAAGTAACATTCTTCTAGATCATGACTTTAACCCCAAGCTTGCTGAATTCGTGTTCGGAAAAGGAAGCTGCGAATTGAAGTACAACTGCAAGGGAAATTGTGGATATAAAGCGCCAGAGTATCAAGAAAAAGGAAACTTAACAGATAAGACAGATGTGTATTCTTTTGGTGTAATTCTTTTAGAGCTGATAACAGGTTCTATGATTACAGAAGAAGAATCAGAACAAAAATATCTTACTGAATGGGCAATCCCACTTCTTAGAGGTAGGAAGTACGCACTGTTGATTGATCCCAATATGAGCAGCCCATTTAATGAACAAGAAGTGGATTTGTTGGTCCAGGTCACAGAAAAGTGCCTCCGAAAGAATCCTGAGAAAAGGTTCACTATGAATATGGTTGTCTCTGTGCTGCAGCGTGATGTTGCTGTTACCGGCGACAGCTATGTCGCAGAAGAGTCCTCCTCATCAGAGAAGTCATGCTTTTTCTTGTGTAGTGCTTCAGATGCAACAAGCCTAAAAGGCAAGAAGGAATTGCCGCCATTAGAGGCAGGTCTATGCAAAGAGGTTGTTGAAGAAAGAGAGGACAACAAAACTTGCAATGAAAGCAACAACAAAACAAAGACGAGGGAAGAAGAGAAGGTTATGGAAACACAAAAAAAAGAAAACTTAGGCGCCAAGGTACATGAATGTAATGGGTGGTGCCTGTCTTATGGTGGAGCTAGACACTATTATCTTCATCAAAAGGCTAAGGAATATACAGCATGCCGAGAATTTTTTATTTTTAGTAATATACTCATTTAA 1047 0.3973 MSEVELLRNARHENLIELLGSCIRESQLLIVYEHTCNGSLDHHLSRASSRSLTWTERMKVATGVAKGLKYLHENNIIHGRIKPSNILLDHDFNPKLAEFVFGKGSCELKYNCKGNCGYKAPEYQEKGNLTDKTDVYSFGVILLELITGSMITEEESEQKYLTEWAIPLLRGRKYALLIDPNMSSPFNEQEVDLLVQVTEKCLRKNPEKRFTMNMVVSVLQRDVAVTGDSYVAEESSSSEKSCFFLCSASDATSLKGKKELPPLEAGLCKEVVEEREDNKTCNESNNKTKTREEEKVMETQKKENLGAKVHECNGWCLSYGGARHYYLHQKAKEYTACREFFIFSNILI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60630g00002 348 Gene3D Phosphorylase Kinase; domain 1 1 38 - -
Stsc60630g00002 348 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60630g00002 348 Gene3D Transferase(Phosphotransferase) domain 1 39 237 - -
Stsc60630g00002 348 PANTHER OS01G0253100 PROTEIN 2 223 - -
Stsc60630g00002 348 Pfam Protein kinase domain 2 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60630g00002 348 SUPERFAMILY Protein kinase-like (PK-like) 2 220 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60630g00002 Stsc-Chr60630 28310 30363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60630g00002 2 219 Trihelix Transcription Factor Family AT5G38560 39.914 6.33e-46 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Stsc60630g00002 Pkinase 7.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60630g00002 - - ahf:112795554 541.576