Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60628g00008 ATGTCCTCCCACTTCATCTTCCTCCTCTTTCTCTTTCTCTTCCACCTTCCACTCCCATCTCTCTCCCAAAACAACACCGCAACATGCCCACTCAACACCACCATCCTCACAACCCAAGGCGGCGACACCGTCCCATCCTTCGACTCAAATTCAAAGTGCCACAACGCCCTCCAAACCCTCCACCTCCTCCAAGCCGACTACCTCCGCCGCCAATCCCGCTTCGTCCCACCCCTAAACTCCTCCGCATCATGTTGGTCCTCCTTCCAATCCTTCATCTCCAAATTCGAACCTAACTTCGACGTTCGCTCCAGTTGCGGCCTCCAAACCTCGTGGATCTCCTATGGCTGCATGAACATCACAACCCTCCAAGACTTGGAATCCATCGTCCCTGCTTCAACCATCCAAAACGTTCAATCTAACTGCAACCAGTCTTTGGACAACAGCGCACCCTGCGCTCTCTGCACCACCAGCTTGTCTTCCTTGCAGTCCTACTTGAACGGCTCCACCGTCGGCAACGTCTCCGATTGCAGAGCCTACACTTCTATCTACGCTGCTTCTCTTGCTGACCCTACTGATCCCGGCACCGCTACCTGCTTGTTCGGCCTTGATTTCTCTTCCTCCGGGAAAAGCAGCAAGGNNNNNNNNNNTAAGAAGGTGATTATTGCTGTTGTTGTTGCTGTTTTCTGTGTTTTGGTGTCGGTTTTGGTTGGTGGGTTCTGGGGTTACTTGAGGTGGAAGAAGAACAGGAACGAGATTCAGAAGAAAATTGGTGGTGGCAAGGGTGAGATTGGTTTGAGTTCTTCTGGATTGGACTCCATGAGCCAGAGCACTACCTTGATTAGATTCAACTTCGATGAAATCAAGAGAGCCACCAGGAATTTCTCTAGGGATAACATAATTGGAAGTGGTGGTTATGGCAACGTTTACAAGGGTTTGCTGAATGATGGATCTCAGGTTGCTATGAAGAGGTTCAAGAATTGTTCTGTTGCGGGTGATGCTAGCTTCACACATGAGGTTGAGGTCATTGCCAGTGTTAGGCATGTCAATCTTGTTGCTTTGAGAGGGTATTGTACGGCCACAACTAATTTAGAGGGTCATCAGAGGATTATTGTGACTGATTTGATGGAAAATGGGAGTCTCTATGATCACTTGTTTGGGTCAAGAGGGAAGAAACTGAGTTGGCCACTTCGGCAGAAGATAGCTCTGGGGACTGCTAGGGGTTTGGCTTATCTGCATTATGGCGCGCAGCCGTCGATCATTCACAGGGATATTAAAGCTAGCAATATTCTTCTGGACGAGAAATTTGAGGCCAAGGTTGCGGATTTCGGGCTGGCAAAGTTCAATCCGGAGGGAATGACACATATGAGTACTAGAGTTGCCGGTACCATGGGGTATGTTGCACCGGAGTATGCACTCTACGGGCAATTGACAGAGAGGAGTGATGTTTTCAGCTATGGCGTCGTGCTTCTTGAATTGTTGAGTGGGAGGAAGGCTCTGGAGACAGACAGTGATGGACAGCCAAATGCACTGACTGACTTGGCCTGGTCATTGGTTAGGGATGGTAAATCATTGGATGTTATTGAAGATGGAATGCCGGAACAGGGTTCGCCGGAGGTTCTTGAGAAGTATGTGCTGGTTGCTGTGCTGTGTTCTCATCCTCAGCTGTATGCTAGGCCTACGATGGACCAGGTTGTTAAGATGCTGGAGACGGATGAGTCCGTGCCTTCGGTTATGGAAAGGCCAATCCCTTTTACTGCTGGGAGGATTGATATTGAGAAATCTGCTCTAAGCAACTCAGGGCAGCTTTGTAGTCCAACCGGTTATCAGGCATTCACAATGCAGAGTAAACGCCTTTCGGATCCTAATCAGAAAGAAGAGCTTAAGGAAGAAGAAGAAGAGGGAAACTCTCAGTCTGGAACCATGAGCGTGGATTAA 1935 0.4884 MSSHFIFLLFLFLFHLPLPSLSQNNTATCPLNTTILTTQGGDTVPSFDSNSKCHNALQTLHLLQADYLRRQSRFVPPLNSSASCWSSFQSFISKFEPNFDVRSSCGLQTSWISYGCMNITTLQDLESIVPASTIQNVQSNCNQSLDNSAPCALCTTSLSSLQSYLNGSTVGNVSDCRAYTSIYAASLADPTDPGTATCLFGLDFSSSGKSSKXXXXKKVIIAVVVAVFCVLVSVLVGGFWGYLRWKKNRNEIQKKIGGGKGEIGLSSSGLDSMSQSTTLIRFNFDEIKRATRNFSRDNIIGSGGYGNVYKGLLNDGSQVAMKRFKNCSVAGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSRGKKLSWPLRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGRKALETDSDGQPNALTDLAWSLVRDGKSLDVIEDGMPEQGSPEVLEKYVLVAVLCSHPQLYARPTMDQVVKMLETDESVPSVMERPIPFTAGRIDIEKSALSNSGQLCSPTGYQAFTMQSKRLSDPNQKEELKEEEEEGNSQSGTMSVD 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60628g00008 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Stsc60628g00008 644 SMART serkin_6 294 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60628g00008 644 Pfam Protein kinase domain 295 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60628g00008 644 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 133 618 - -
Stsc60628g00008 644 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 262 373 - -
Stsc60628g00008 644 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Stsc60628g00008 644 Pfam SPARK 24 176 IPR043891 -
Stsc60628g00008 644 MobiDBLite consensus disorder prediction 610 644 - -
Stsc60628g00008 644 SUPERFAMILY Protein kinase-like (PK-like) 271 569 IPR011009 -
Stsc60628g00008 644 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 375 576 - -
Stsc60628g00008 644 MobiDBLite consensus disorder prediction 619 635 - -
Stsc60628g00008 644 ProSiteProfiles Protein kinase domain profile. 294 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60628g00008 644 Gene3D Transferase(Phosphotransferase) domain 1 375 579 - -
Stsc60628g00008 644 Gene3D Phosphorylase Kinase; domain 1 265 373 - -
Stsc60628g00008 644 CDD STKc_IRAK 300 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60628g00008 Stsc-Chr60628 36671 39009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60628g00008 6 613 Receptor kinase-like Gene Family AT2G48010 60.749 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Stsc60628g00008 Pkinase 6.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60628g00008 - - gmx:100786298 912.138