Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60628g00003 ATGGCTGGAAGCAACCAAGTCAACATCAATGAATCTCGGCGTGTTGTTCCGCTCAACACCTGGGTTCTCATCTCCAATTTCAAGCTTGCTTACAATCTTCTAAGGCGTGCAGATGGAACATTCAACAGAGACTTAGCTGAGTTTCTCGATCGCAAGGTTCCATCAAATTCCATCCCCGTTGACGGAGTCTGGTCCTTCGATCATCTCCATCAAACAACCGCCGGTCTCTTCTACCGTGTATACCTTCACGAATCTCATCAATGGGGCTCTGGAACTGGAATCAACGTCATTCCAGATATGGATAAGCCTCTCAGCACCACCGACATCGTCCCCGTCATAATCTTCTTCCACGGCGGAAGCTTCTCCCATTCCTCCGCCAACAGCGCCATCTACGACACTTTCTGCCGCCGTCTCGTTAATGTAACAAATTCCGTCGTCGTCTCCGTCAACTACCGCCGTTCGCCGGAGCACCGCTTCCCCTGCGCCTACGAGGACGGCTGGACCGCCCTCCAGTGGGTCAGATCGAGAAAATGGCTCCGCAGCGGGAGGCCAAATAAATCAGAATCGGAATCTAGGGTTCACGTTTACATGGCTGGTGACAGTTCAGGTGGAAACATTGTTCACCACGTGGCGGTGAGAGCGGCGGAGGCGGGAATGGAGGTTCTTGGTAACATCCTTCTTCATCCGTTGTTCGGTGGAGAGAAGAGGACTGAGTCCGAGATACGGCTTGATGGGAAGTATTTCGTGAAGCTTCAAGACCGAGATTGGTATTGGAGGGCGTTTTTGCCTGAAGGAGAAGACAGAGACCACCCTGCTTGTAACCCCTTTGGTCCAAGGGGTAGGTCCCTTAAGGGCATGACCTTATTCCCTAAGAGTCTTGTTTGTGTTGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGCTTATGCTCATGCCCTTAGAAGCTTTGGTCACCACGTCAATCTCCTTTACCTTAAGGATGCTACTATTGGTTTCTATTTCTTGCCAAACAATGACCATTTCTCTTCCCTTATGAACCAGATCAACAACTTCGTCAACCCTAACTGTCAATAA 1074 0.5009 MAGSNQVNINESRRVVPLNTWVLISNFKLAYNLLRRADGTFNRDLAEFLDRKVPSNSIPVDGVWSFDHLHQTTAGLFYRVYLHESHQWGSGTGINVIPDMDKPLSTTDIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNVTNSVVVSVNYRRSPEHRFPCAYEDGWTALQWVRSRKWLRSGRPNKSESESRVHVYMAGDSSGGNIVHHVAVRAAEAGMEVLGNILLHPLFGGEKRTESEIRLDGKYFVKLQDRDWYWRAFLPEGEDRDHPACNPFGPRGRSLKGMTLFPKSLVCVAGLDLLQDWQLAYAHALRSFGHHVNLLYLKDATIGFYFLPNNDHFSSLMNQINNFVNPNCQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60628g00003 357 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 113 129 IPR002168 GO:0016787
Stsc60628g00003 357 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 195 207 IPR033140 -
Stsc60628g00003 357 Pfam alpha/beta hydrolase fold 113 333 IPR013094 GO:0016787
Stsc60628g00003 357 FunFam Gibberellin receptor GID1 1 354 - -
Stsc60628g00003 357 SUPERFAMILY alpha/beta-Hydrolases 53 353 IPR029058 -
Stsc60628g00003 357 Gene3D alpha/beta hydrolase 1 353 IPR029058 -
Stsc60628g00003 357 PANTHER ARYLACETAMIDE DEACETYLASE 67 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60628g00003 Stsc-Chr60628 11572 13777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60628g00003 1 352 Carbohydrate Esterase AT3G63010 70.904 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60628g00003 K14493 - gmx:100788435 536.954