Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60621g00009 ATGGGAGATATCTTGCCATCTCCATGTTTTAACATGTTTGTGTCTGATAGACTTCGAATGTGGCATACGAGTCACACCTTAGATTTTCGTCTTCCTATGCTTGCCTTTCAAGTTTTCTACACCATATTAGTTGGCCGTCTCATCTTCTATCTATTCAAACCTCTCCATCAACCTCGCATTATTTCATACGTCCTTGTTGGTTTTCTGCTAACTCCACCACTCCTGGGGAACATTCCAGCAATCTTTCACTTCATTTACCCTGTAGATGGAATAATCACACTTGAAGTTCTAGGACATTTTGGCCTCATCTACTACGCTTTCCTCAACGGGGTTGAAATGAACTTAGATACAATTCTGAAATCCAAGAATGAAGCTACAAGCATTGCAGCCATTGGAATCTTCTTTCCTGTTATAATAGGACCAGGATTATATGCCCTGCATAGGAAATTCTATCTCAATAACTCGTTCAAGCTTGAAGAGCTTTCAAGCCATGCTTATTTGATTTGGACTTTGGTTCTCACAGTTACAGGCTTTCCAAACCTTGTTGAAATCCTTTCAGAGCTGAAGCTTCATTACACCGGCCTAGGCAAAGTTGCATTAACAGCTGCAATGATTAGTGACACATACAACTGGATTCTCTTCACATTGTTGGTGCCGTTTTCAATTGACAGTTCAAATGCAATTTATTCAGTGCTGTGCACGGTTCTCTTCCTTATTGTGTGCATCTTTCTGGTGCGCCCTGTACTCACAAAGATCATTGAACGCAAGACGGAAAATGATGAATGGGATGAGTACCAGCTCCTTTTTGTGTTGATGGGGCTTCTTGTGTGTTCTTACATTACAGACATTCTTGGCACACATAGCATTGTTGGTGCTTTTGTGTACGGACTGATCTTGCCTCATGGGAAGTTTGCTGATTTGGTTATGTCCGTTTCTGATGATTTCGGCGGCGGGTTTCTGGCGCCGCTTTACTTCTCCGGCAATGGAATGAAGCTTATATTGAAGTCTGTTTTTGCTCATGCAAATTGGCCATTGACATTGCTGGTTTTGGTCTTAGCTTGTGTCACAAAGATATTAGGAACTCTTTTTGCTACCTCCTTATTTGGTAGGCCTGCTAGAGATGGTTTTGCTATTGGATTGCTTCTTAACACCAAAGGGGCTTTGGCACTAATTATGCTAAACATTGCTTGGGATAAGATGATATTTTTTGCACCAACATATGCAGTTCTTACTGCTTCTGTTCTTCTAATGACTATAGCAGTTTCGCCCATCATCAACTTCGTCTTCAAGCCAAGAAAGAGATTTCAGCAGAACAAGCTAAGAACCATACAAAAGCTAAGAGCCAATGCAGAGCTTCGAATCATGGCATGTGTCCACAACACTCACCACGCCACAAGCATGGTCAACATCCTTGAACTTTTCAATGCTACTAGACTCTCCCCAATCCATGTGTTCAGCTTCTACCTCGTTGAAATCACACAACGTGCAGCAGCACTAGTAGTTGCTCACATGGACAAGCCAAGTACCCAGTTCGGAGTTCAGAACAATAATAATCTCACCAAGTCCCAAGTGGAGTTAGAAAACATTGCATACACCTTCAAGGCTCTTGGGAATGGGGACGGACACGATGCTTTCCGAGTTGACACCACGAGCGTGGTTTCTTCCTATGAAACAATTCACAAGGATATATACATCTCTGCAAGAGAAAGAGCCACCAGCTTGATCCTCATTCCATTCCACAAGCAGCTAAGTCCAGATGGCAATAACTCGCTTGAAACAACCAATGCTGTGTACAGAGACATAAACAAGAATGTGATGCAAGATGCACCTTGTTCTGTGGGACTATTCGTGGACCGTGATCTTGGGACATTCACTAAGATGTATCTTCATGTTGTCATGCTCTTTGTTGGAGGCCCAGATGATCGTGAAGCTTTAGCAATTGCATGGAAGATGGCAGGACATCCTAGAGTTCAGCTATCCATGATTCGAATTTGCTTGTTTGATGAAGCTGCAAAAGAAACAACTCATTCTGAAGAAGCACAACAAGGGATACTATCAAATGCAATGGACAATGAGAAGCAGAAGGAGTTGGATGATGAGTACATAAGTAAGTTCAGATACACTGCAGTGAATAATGAGGATTCTATATCATACTCAGAGGTTGATATTCATAAAGGGGAAGATATTCCAAGAATACTGAAGGAGATTGATGAGAAAGGGTGTGATTTGTATGTGGTTGGACAAGGGAATTGCAGGAACTCAATATTGTTCTCAAACTTAATGGAATGGTGTGATTGCTTGGAGTTAGGTGTAATTGGGGATATTTTAGCATCAAATGTGTTTGAATCAAACTCATCAATTTTAGTGGTTCAACAATATGGTTTTGGGGGGATGAAATTAGAGAGGAAACAAGGGCAGATGGTAGGAAATAGTGGACGCTTTGGGACGCTAGTTGTGACAACAGAATAA 2469 0.4168 MGDILPSPCFNMFVSDRLRMWHTSHTLDFRLPMLAFQVFYTILVGRLIFYLFKPLHQPRIISYVLVGFLLTPPLLGNIPAIFHFIYPVDGIITLEVLGHFGLIYYAFLNGVEMNLDTILKSKNEATSIAAIGIFFPVIIGPGLYALHRKFYLNNSFKLEELSSHAYLIWTLVLTVTGFPNLVEILSELKLHYTGLGKVALTAAMISDTYNWILFTLLVPFSIDSSNAIYSVLCTVLFLIVCIFLVRPVLTKIIERKTENDEWDEYQLLFVLMGLLVCSYITDILGTHSIVGAFVYGLILPHGKFADLVMSVSDDFGGGFLAPLYFSGNGMKLILKSVFAHANWPLTLLVLVLACVTKILGTLFATSLFGRPARDGFAIGLLLNTKGALALIMLNIAWDKMIFFAPTYAVLTASVLLMTIAVSPIINFVFKPRKRFQQNKLRTIQKLRANAELRIMACVHNTHHATSMVNILELFNATRLSPIHVFSFYLVEITQRAAALVVAHMDKPSTQFGVQNNNNLTKSQVELENIAYTFKALGNGDGHDAFRVDTTSVVSSYETIHKDIYISARERATSLILIPFHKQLSPDGNNSLETTNAVYRDINKNVMQDAPCSVGLFVDRDLGTFTKMYLHVVMLFVGGPDDREALAIAWKMAGHPRVQLSMIRICLFDEAAKETTHSEEAQQGILSNAMDNEKQKELDDEYISKFRYTAVNNEDSISYSEVDIHKGEDIPRILKEIDEKGCDLYVVGQGNCRNSILFSNLMEWCDCLELGVIGDILASNVFESNSSILVVQQYGFGGMKLERKQGQMVGNSGRFGTLVVTTE 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60621g00009 822 PANTHER CATION/H + ANTIPORTER 25 793 - -
Stsc60621g00009 822 Gene3D - 33 439 IPR038770 -
Stsc60621g00009 822 Pfam Sodium/hydrogen exchanger family 41 424 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60621g00009 Stsc-Chr60621 50786 53920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60621g00009 20 793 Antiporter Super Family AT2G13620 36.341 9.29e-174 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60621g00009 - - gmx:100800072 1066.22