Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60615g00011 ATGAGCTGCAACGGTTGCCGTGTGCTCCGAAAAGGTTGCAGCGAAGAGTGCATGCTAAGGCATTGCCTGATGTGGATAGAGGACAATCCAGAAGCACAGGGTTACGCCACCCTCTTCGTCGCCAAGTTCTTCGGCCGAGCCAACCTCATGTCTTTCCTTTCCTCCGTTCCCACTAACCACAGATCCGCATTGTTTCAGTCACTTCTGTACGAGGCAGTGGGGCGCACCATAAACCCGGTGGATGGGGCAGTGGGGCTGCTCTCCACAGGCAACTGGCATCTCTGTCAGTTGGCGGTGGACAAAGTCCTCCGAGGGGGAGCTGCCGCCTTGATGATGGACACTGGTCATCACCACCAAGTAGTCATGAAGAGAAAGCAAGTTAGTTTCGAGGATTATTTCTTGAAGGAAGCAGAATCACAAGACAGAAATGGAGGGGGTCATCATCATCATCATCAATCAAAGAAGCAACGCGCGTGTTCACCTCCCACCAGCAACGAGGAATCCAACACCACCACCTTGACAACTACGACTCATCATTCGCCTTCTCAAACTCAAACCAAGCCCCTTACGCTTTTCTTCTAA 582 0.5206 MSCNGCRVLRKGCSEECMLRHCLMWIEDNPEAQGYATLFVAKFFGRANLMSFLSSVPTNHRSALFQSLLYEAVGRTINPVDGAVGLLSTGNWHLCQLAVDKVLRGGAAALMMDTGHHHQVVMKRKQVSFEDYFLKEAESQDRNGGGHHHHHQSKKQRACSPPTSNEESNTTTLTTTTHHSPSQTQTKPLTLFF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60615g00011 193 ProSiteProfiles LOB domain profile. 1 108 IPR004883 -
Stsc60615g00011 193 MobiDBLite consensus disorder prediction 139 193 - -
Stsc60615g00011 193 MobiDBLite consensus disorder prediction 157 193 - -
Stsc60615g00011 193 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Stsc60615g00011 193 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60615g00011 Stsc-Chr60615 64571 65835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60615g00011 1 107 AS2 family AT3G49940 74.766 2.72e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc60615g00011 LOB 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60615g00011 - - gmx:100816269 201.06