Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60613g00012 ATGGTGATGATGGAGGAGATGGGAATAGGAGTGGCCCTTATAATAAGTATGGCCATTGTTTTAGTTTTAATGGTGAAGAAGAATGTGAATTGGTGGCTGTATGAATCCAAATTGGGAGATAAGCAGTACTCTCTGCCACCAGGTGACATGGGATGGCCCTTCATTGGAAATATGTGGTCCTTCCTCAGAGCTTTCAAGTCCTCTGATCCCGATTCCTTCCTCTCCGCTTTTGTCTCCAGATTTGGAAAAACTGGAATTTACAAGGCCTTGATGTTTGGGAACCCAAGTGTGATTGTGACAACACCTGAAACATGCAGAAGGGTCTTAACAGATGATGAAAAATTCCAACCAGGTTGGCCTAGATCAACCATTGAGCTTGTTGGCAAGAAGTCATTCATTTCGATGCCCTACGACGAACACAAGCGCCTCCGGCGCCTGACATCTTCGTCGATCAACGGCATGGAGGTGCTGTCTCTTTACTTGAAATATATTGAAGAAAATGTGATAAGCTCATTGGAGAAATGGACCAAAATGGGACAAATTGAGTTCTTAACTGAGATAAGGAAGCTTACATTTAAGATCATAATGCATATTTTCCTAAGCTCAGAAAGTGAACCTATTATGGAAGCTTTGGAAAGGGAATACACTGCTCTTAACTATGGTGTTAGAGCCATGAAGATTAATATTCCTGGATTTGCATACCATAAAGCATTCAAGGCTAGGAAAAATCTATTGTCTGTATTCCAATCTATTGTGGATGAGAGAAGGAAATTAAGGAAGGAATGTTCACCTATTAAAGCCAAGGATATGATGGATTCTCTGCTAGATGTTGAAGATGATAATGGAAGGAAGTTGAGTGATGAAGAAATCATTGATGTCATGTTGATGTACTTGAATGCTGGCCATGAATCTTCAGGACATATTACAATGTGGGCAACCTATTTCCTCCAAAAGCACCCTGAATATCTCCAAAAGGCTAAGGAAGAGCAAGAAGAAATAATAAAGAGAAGACCTTCTACACAGAAAGGGTTGACACTAAAGGAAATTAGACAGATGGATTTTCTCTACAAGGTGATTGATGAAACAATGCGTGTGATTACATTCTCATTGGTGGTTTTTAGGGAGGCGAAATGCGACGTCGTTATGAATGGTTACACCATTCCAAAAGGTTGGAAAGCTCTTGTGTGGTTCAGATCAGTTCATCTTGATCCTGAGATATATCCTAATCCAAAGGAATTTAATCCCCACAGATGGGATGCTAATGAACATAAGGCTGGAGAATTCCTTCCCTTTGGAGGAGGAACTAGACTCTGTCCTGGGAATGATCTTGCTAAGATGGAAATAGCAACTTTTCTTCACTATTATGTTCTTAATTACAGATTTGAACAGCTTAATCCTAAATGCCCTGTGAGATACTTACCTCATACAAGGCCAATGGACAATTGCTTGGGAAGGTTAAAGAAATGTTCAACATCAACCTAA 1482 0.4015 MVMMEEMGIGVALIISMAIVLVLMVKKNVNWWLYESKLGDKQYSLPPGDMGWPFIGNMWSFLRAFKSSDPDSFLSAFVSRFGKTGIYKALMFGNPSVIVTTPETCRRVLTDDEKFQPGWPRSTIELVGKKSFISMPYDEHKRLRRLTSSSINGMEVLSLYLKYIEENVISSLEKWTKMGQIEFLTEIRKLTFKIIMHIFLSSESEPIMEALEREYTALNYGVRAMKINIPGFAYHKAFKARKNLLSVFQSIVDERRKLRKECSPIKAKDMMDSLLDVEDDNGRKLSDEEIIDVMLMYLNAGHESSGHITMWATYFLQKHPEYLQKAKEEQEEIIKRRPSTQKGLTLKEIRQMDFLYKVIDETMRVITFSLVVFREAKCDVVMNGYTIPKGWKALVWFRSVHLDPEIYPNPKEFNPHRWDANEHKAGEFLPFGGGTRLCPGNDLAKMEIATFLHYYVLNYRFEQLNPKCPVRYLPHTRPMDNCLGRLKKCSTST 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60613g00012 493 CDD CYP90-like 78 488 - -
Stsc60613g00012 493 PANTHER CYTOCHROME P450 26 42 475 - -
Stsc60613g00012 493 Pfam Cytochrome P450 46 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60613g00012 493 Gene3D Cytochrome P450 36 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60613g00012 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Stsc60613g00012 493 FunFam Ent-kaurenoic acid oxidase 36 489 - -
Stsc60613g00012 493 SUPERFAMILY Cytochrome P450 42 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60613g00012 493 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60613g00012 493 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60613g00012 493 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60613g00012 493 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60613g00012 493 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60613g00012 493 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60613g00012 493 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60613g00012 493 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60613g00012 Stsc-Chr60613 41948 48983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60613g00012 27 486 Cytochrome P450 AT1G05160 67.679 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60613g00012 K04123 - gmx:100781238 847.81