Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60612g00009 ATGGTGTCTATGGAATTGGAATGGTGGTGGTTTCCAATTATTCCAAGTGTACCTATGTTTTCATCCATACTATTCACCATGCTAGGGTTAATAGTAGGGTTTGTGTGTTACTTTTATGGGCCCTATTGGAGGATTAGAAGAGTTCCGGGCCCACCATCCCTTCCTCTTGTAGGACACCTTCCATTGCTGGCTAAGTATGGCCCTGATGTCTTCTCTGTCCTTGCTAAGGAATATGGCCCAATTTACAGATTTCATATGGGAAGACAGCCACTAATAATAGTAGCAGATGCAGAGCTTTGTACTGAAGTTGGAATAAGAAAGTTCAAACAAATTTCAAACAGAAGCATTCCTTCTCCTATTTCTGCTTCCCCTCTTCACCAAAAAGGTCTCTTCTTCACTAGGGGTCAACGCTGGTCAACCATGAGAAACACCATAATCTCAATGTACCAACCATCACACTTAGCCAGCTTAATTCCAACAATGCAATCATTCATAGAATCATCAACACAAAACCTTGATCAAATCACAAACACTAATGAAGACATAACATTCTCCAATCTCTCACTTAGGCTTGCCACCGATGTAATTGGTGATGCTGCATTTGGTGTCAACTTTGGACTATCAAATCCCAAATATGCATCTAATTCTGATTCATCAATCAAGAACAACAACAATGTTAATTCTAATGTTAACGAGGAAGTGTCTGATTTCATTAATCAACACATTTATTCCACTACACAACTCAAAATGGACCTATCTGGTTCATTTTCTATCATTCTAGGACTACTTGTACCGTTGCTTCAAGAACCGTTTCGGCAGATCTTGAAGCGAATTCCGGGTACCATGGATTGGAAAATTGAGAATACTAACAAGAAACTGAGCGGGCGGCTCGACGAGATTGTGAAGAGGAGGATGGAAGAACGTAACAGGAGTTCCAAGAATTTCTTGTCACTTATTTTGAATGCAAGAGAATCAAAGAATGTGTCTGAGGATATATTCACACCAGATTATATCAGTGCTGTTACTTATGAACACTTGCTTGCAGGGTCAGCTACCACTTCTTTTACATTGTCTTCTGTTGTTTATTTGGTTGCTGGCCATCCTGAAGTTGAGAGCAAGTTGATTCGAGAGATTGATGCCTTCGGTCCGCCCGATCGGATGCCGACTGCTCAAGAACTTCAAGATAGTTTTCCTTATCTTGATCAGGTGATTCAAGAGGCTATGAGGTTTTACATGGTCTCCCCATTAGTTGCAAGAGAAACATCAACTGAAGTAGAGATAGGAGGTTACCTCCTTCCAAAGGGAACATGGGTGTGGCTAGCACTTGGAGTTCTAGCAAAAGATCCAAAACACTTTCCAGAGCCAGAGAAGTTCAAACCAGAGAGATTTGACCCTAAATGTGATGAGATGAAACAAAGGCACCCTTATGCTTTTATACCATTTGGAATTGGTCCTCGTGCTTGTATTGGTAAAAAGTTTTCACTACAAGAGCTCAAGCTTTCTCTTATTCATTTGTATAGGAAATACTTGTTTCGCCATTCACCTAACATGGAGAAACCTTTAGAACTAGAATATGGTATAGTTCTCAATTTCAAGCATGGTGTCAAGCTTAGAGTCATAAAGAGAACAAATTAA 1635 0.4018 MVSMELEWWWFPIIPSVPMFSSILFTMLGLIVGFVCYFYGPYWRIRRVPGPPSLPLVGHLPLLAKYGPDVFSVLAKEYGPIYRFHMGRQPLIIVADAELCTEVGIRKFKQISNRSIPSPISASPLHQKGLFFTRGQRWSTMRNTIISMYQPSHLASLIPTMQSFIESSTQNLDQITNTNEDITFSNLSLRLATDVIGDAAFGVNFGLSNPKYASNSDSSIKNNNNVNSNVNEEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPLLQEPFRQILKRIPGTMDWKIENTNKKLSGRLDEIVKRRMEERNRSSKNFLSLILNARESKNVSEDIFTPDYISAVTYEHLLAGSATTSFTLSSVVYLVAGHPEVESKLIREIDAFGPPDRMPTAQELQDSFPYLDQVIQEAMRFYMVSPLVARETSTEVEIGGYLLPKGTWVWLALGVLAKDPKHFPEPEKFKPERFDPKCDEMKQRHPYAFIPFGIGPRACIGKKFSLQELKLSLIHLYRKYLFRHSPNMEKPLELEYGIVLNFKHGVKLRVIKRTN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60612g00009 544 Gene3D Cytochrome P450 38 544 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 SUPERFAMILY Cytochrome P450 41 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS P450 superfamily signature 348 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 Pfam Cytochrome P450 49 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS E-class P450 group I signature 401 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS E-class P450 group I signature 357 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS E-class P450 group I signature 441 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS E-class P450 group I signature 337 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60612g00009 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Stsc60612g00009 544 PANTHER THROMBOXANE-A SYNTHASE 22 543 - -
Stsc60612g00009 544 FunFam Cytochrome P450 3A4 35 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60612g00009 Stsc-Chr60612 59777 65864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60612g00009 86 542 Cytochrome P450 AT2G26170 71.991 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60612g00009 K20771 - gmx:100805689 844.728