Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60611g00005 ATGGAATTTCAGATTCATCACTTGCTAGCCCTTTTCTCTTTCTTCCTCTTCATCATCATTTCCTTACTCAAACAAAGGAACAACACCAAGAAAACTCACACAATTCCGAATATACCCCCATCACCATGGAAGCTACCTATCATAGGAAACATGCTCAACCTTGTTGGTTCAGCACCACATAGAAAACTAAGAGACTTAGCACAAAAATATGGACCTTTAATCCATCTTCAACTCGGTGAAATCTTCTTTGTTGTTGTTTCTTCAGCAGAGTATGCCAGAGAGATAATGAAAACCCATGATGCGAATTTCGCATCACGGCCTTACTCTCTAGCATCTGATGTGGTTTTCTATGGTTCTACAGACATAGCTTTTTCGCCATACGGCGAATATTGGAGACTACTCCGTAAGATATGTACTATGGAACTTTTAAGTCCGAAACGTGTGCAATCGCACTGGCCAATCAAAGAGAAAGAGGTCAACAACCTCGTCAAACAAATTGCTTCCGAAGAAGGATCAGTTTTCAATCTTAGTCAAGCAGTTGTATCAATGATGTTTTCGATTACTTCGATGGCGGCGTTTGGCAAGAAGTACAACGAACAAGAAGAGTTCATTAAAGCTGTTAGAGAGGTTTTGAAGCTGGCTGGTGGTTTTTACATTGGAGACTTGTTTCCATCGGCAAAATGGATTCAGAATCTAAGTGGGATTAGGCCTAAGCTTGAGGATTTGCATAGGAGAGTTGATAGGGTTCTAGAGATCATCATCAATGACCATAGACAATCAAGAACTAATAAAGAAGTGGAGGATCTTGTGGATGTTCTATTGAAATTTGAGGGGAGTAGTAGTGATGTGGATCTTCGCTTAACCAACGACAATGTCAAGGCTATAATCTTTGATGTCTTCACCGGCGGAAGTGACACAGCAGCAACTACCATTAACTGGGCAATGGCTGAGATGATGAAGAATCCAAAAATATTGAAGAAAGCAGAAGCTGAAGTGAGAGAGGTATTAGATAGAAGAACAACAGGAGCAGAGGTTGATGAAACATGCATTGAAGAAATGAAATACTTGAAAGCAGTCATCAAAGAGACGCTGAGACTACACCCTCCTGGCCCTCTCTTGATTCCGCGGGAATGCGGACGAGCATGCGAAATCCATGGATATCACATACCAGCCAAAAGCAAGATCATAATCAATGCATGGGCGATCGCAACAGATCCAAACTACTGGACCGAACCGGAGAGGTTTTATCCCGAGAGATTTCTTGATAGCACAATCGATTTCAAAGGGAATAACTTCGAGTTCATTCCGTTTGGTGCTGGAAGAAGAATTTGCCCTGGAATGCACTACGGTGTTGCAAGTGTTGAGTTGATCCTTGCATTGTTGTTGTATCACTTTGATTGGAAGCTTCCTAGTGGGATCAAAAGTGAGGATTTGGATATGTCTGAGTTGTTTGGAGCATCTGTTGTTAAAAAATCTGACTTGTTCTTAGTTCCTATGGTTGCTCGTTCTATTGCGTGA 1518 0.4157 MEFQIHHLLALFSFFLFIIISLLKQRNNTKKTHTIPNIPPSPWKLPIIGNMLNLVGSAPHRKLRDLAQKYGPLIHLQLGEIFFVVVSSAEYAREIMKTHDANFASRPYSLASDVVFYGSTDIAFSPYGEYWRLLRKICTMELLSPKRVQSHWPIKEKEVNNLVKQIASEEGSVFNLSQAVVSMMFSITSMAAFGKKYNEQEEFIKAVREVLKLAGGFYIGDLFPSAKWIQNLSGIRPKLEDLHRRVDRVLEIIINDHRQSRTNKEVEDLVDVLLKFEGSSSDVDLRLTNDNVKAIIFDVFTGGSDTAATTINWAMAEMMKNPKILKKAEAEVREVLDRRTTGAEVDETCIEEMKYLKAVIKETLRLHPPGPLLIPRECGRACEIHGYHIPAKSKIIINAWAIATDPNYWTEPERFYPERFLDSTIDFKGNNFEFIPFGAGRRICPGMHYGVASVELILALLLYHFDWKLPSGIKSEDLDMSELFGASVVKKSDLFLVPMVARSIA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60611g00005 505 PANTHER CYTOCHROME P450 71B11-RELATED 18 499 - -
Stsc60611g00005 505 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Stsc60611g00005 505 Gene3D Cytochrome P450 32 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 Pfam Cytochrome P450 39 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 FunFam Cytochrome P450 99A2 27 499 - -
Stsc60611g00005 505 CDD CYP71-like 69 494 - -
Stsc60611g00005 505 SUPERFAMILY Cytochrome P450 39 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60611g00005 505 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60611g00005 Stsc-Chr60611 53327 57606 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60611g00005 39 498 Cytochrome P450 AT3G26330 43.284 6.70e-133 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60611g00005 - - gmx:102665189 642.114