Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60606g00010 ATGTCGGTGAAGGAGTGCGGGCACCACAAGAGCAAGAAGAAGAAGATCTTCAAGAGAATCTTCTGGTGGACAGCCATAATCGCCTTCATCGTCCTCGTAACAGTCCTCATAATATGGGCAATCCTTCAGCCATCAAAACCAACCTTCATCCTCCAAGACGTAACCGTCTACGCCTTCAACGCTTCCGTCGCCAACTTCCTCACCTCCAACTTCCAGGTCACCATCTCCTCCCGCAACCCCAACGACAACATCGGAATCTACTACGACCGCCTCGACGTCTTCATCTCCTACCAGAGCCAGCAGATCACTCTTCCCACTTCCATTCCTCCCTCCTACCAGGGCCACAAGGAGGTCGACATCTGGTCCCCCTTCGTCTCCGGCAACAATGTTCCGGTGGCTCCCTTCAACTACCAAGGACTAAGCCAGGACCAGAACAACGGCAACGTCCTTATCAACGTCAAGCTCGACGGAAAGGTCCGATGGAAGGTCGGTGCCTTTGTCTCCGGCCATTACCACATCTATATCCGGTGCCCTGCCTTCATCACTTTCGGACCCAGCAGTAGCGGCATCAAACTCGGAGATAGCGGCGCCGTTAAGTATCAGCTTGTTCAGCGCTGCACCGTCGGTGTTTGA 633 0.5403 MSVKECGHHKSKKKKIFKRIFWWTAIIAFIVLVTVLIIWAILQPSKPTFILQDVTVYAFNASVANFLTSNFQVTISSRNPNDNIGIYYDRLDVFISYQSQQITLPTSIPPSYQGHKEVDIWSPFVSGNNVPVAPFNYQGLSQDQNNGNVLINVKLDGKVRWKVGAFVSGHYHIYIRCPAFITFGPSSSGIKLGDSGAVKYQLVQRCTVGV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60606g00010 210 PANTHER OS05G0367900 PROTEIN 18 192 IPR044839 GO:0098542
Stsc60606g00010 210 Pfam Late embryogenesis abundant protein 74 173 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60606g00010 Stsc-Chr60606 54717 55874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60606g00010 49 188 SNARE and Associated Proteins AT1G32270 26.761 3.88e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60606g00010 - - gmx:100795832 331.643