Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60606g00009 ATGGCTGATAATAAGGGCCCCGCCATTCCCCCGGCAGAGCCACCACGCCGCTACCGCCACCAACGAAGCAGAACCTGCTGCTGCTGCCTATTCAGCGTCATCTGGAAGCTTCTACTAGCTCTCATCATCCTCGCTGTCATTGCAGTCCTCGTATTCTGGGTGGTTGTTCAACCCCGCATATTCAAGTTTCACGTCAACAACGCAGAGATAACCCAAATGGACTACAACAGCAACACCACCCAACTCCGCTACAACATGGTGCTCAACTTCACCGCCCACAACCCCAACAAGAAGCTCGGCATCTACTACGACAAGGTTCTAGCCAAAGCCTTCTTCATGGACACGGAGTTTGCCTCCGCCAACGTCATACCTTTCATGAACTCCTTCAGGCAAGACAAGAAGGGAACCAACCCTATGAGCGGCGTTTTCTCTGGTCAACAATTGATTTTCCTTGATTATACCCAGTACTCACAGATCAGTGACGATAAGAATCGTAGGAATTTTGAGATCTACGTGAAGCTCTACTTTGAAATGAGGTTCAGGCTTGGGGATTTTATTTCCGGCACCTACAAGCCCAAAGTGAAGTGTGATCTCAACGTTCCATTTCACAACGCCACCAAAGCTTTCACTTCTTTTAAGACCACCAAGCAACCAAACCTGAGCGGAGCGTACTACGGACCGGCCATTCCACCGGCTGAGCCGCCACGACGCTACCGCCCTGACCGTAACAGAAGCTGCTTCTGCTGCCTATTCAGCGGCTTCTGGAAGATTCTTCTCACGCTCATCGTCCTCGTTGTGATAGCAGGAGTGATATTCTACCTAGTGGTTCAACCTCGCATATTCAAATTCTACGTCAACAACGCCGAAATCACGCAATTCGATTACAACAGCAACACCACCCAACTCCGCTACAACATGGTGCTCAACTTCACCACTCACAACCCCAACAAGAAGCTCAGCATCTACTACGACAAGGTTGTAGCCAAAGCCTCCTTCATGGACACGCAATTCGGCTCCGCTGATGTCATCACTTTCATGAACTCGTTTAGGCAATACAAGAAGCAAAGCAACCCTATGAGCGGTGTTTTCTCTGGACAACAGAACATTTTTCTTGATTATTCTCGATACTCGCAGATCAGTGATGACAAGAATGATAGGTCTTTTGATATTTTTGTGAAGCTCTACTTCAGGATGAGGTTTAGGCTTGGTGATGTGATTACTCGCACTTACAAGCCCAAAGTTAAGTGTGACCTCAAGGTTCCGTTCATCAATGGCACCAATGCTTTCACCTTCTTTAAGCTCACCAAGTGCGATATTGATTTCTGA 1326 0.4804 MADNKGPAIPPAEPPRRYRHQRSRTCCCCLFSVIWKLLLALIILAVIAVLVFWVVVQPRIFKFHVNNAEITQMDYNSNTTQLRYNMVLNFTAHNPNKKLGIYYDKVLAKAFFMDTEFASANVIPFMNSFRQDKKGTNPMSGVFSGQQLIFLDYTQYSQISDDKNRRNFEIYVKLYFEMRFRLGDFISGTYKPKVKCDLNVPFHNATKAFTSFKTTKQPNLSGAYYGPAIPPAEPPRRYRPDRNRSCFCCLFSGFWKILLTLIVLVVIAGVIFYLVVQPRIFKFYVNNAEITQFDYNSNTTQLRYNMVLNFTTHNPNKKLSIYYDKVVAKASFMDTQFGSADVITFMNSFRQYKKQSNPMSGVFSGQQNIFLDYSRYSQISDDKNDRSFDIFVKLYFRMRFRLGDVITRTYKPKVKCDLKVPFINGTNAFTFFKLTKCDIDF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60606g00009 441 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 230 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60606g00009 Stsc-Chr60606 49046 52325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60606g00009 275 430 SNARE and Associated Proteins AT1G32270 29.747 8.89e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60606g00009 - - gmx:100807701 297.745