Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60606g00007 ATGCCCGGCCCCGCCGAGCAGCCGCCGCAGGCCGGCGATGCGCCGTCTGACCTCGCATTCGACGATTTCTCCTCCCAATTTGATGGCTTCCCCATCCCCTCCATGGATGCGCTTTTCGCCGAAAACGCCGGCGGCACGCTGAATACCGACGCCTTCGCCTCCGATCTCGAATTCCCCATGGATTTTGGCGACGGTGGTGACTATGAGATCACCTTCGATGACCTCGATAACCTTTACATCCCCTCCGATGCCGACGATTTCCTCCTCCCCGACGCATGCAATTCTAATGGCGACCTGATTTTGCCAACGAACGGTGATCTGGGCGATTGTTCCGGTAAGAATTCCGATTGCGACGCCGCTAATTCAGACTCTCCGGAATCAGGATCCTGTGCTGTTGCCGGCGACCAGAGTTCAAGTGTTTCTAGGTTTTTGAATTCTCAGTCCTCCTCGGAGTCAGGCAGCTGCAAGCGCGATCTTTCACCTAATCCTCGTGACTCTGCTGATGTGAAAGACTCGAGGTTTCCGTCGCATGATTCTGATTCGTGTGGCGAAAGGGAAGAATCGTCGAATGGTGCCATTTCATCGCGGAGTTCGGGGAACGGTAGCGGGTCGGGTGTATACGAAACCATGAACTCGCCCTCACCTGATTGCGGTCGTTACGAGAGGGAAATTTCATCGTCACATGCACATGCAATTTTGGATCAGAACGTGAAATTGGAGGATAATGGAAAAGGTTGTGATCTGAAGAGAAAGCAAGAGAACAGTGAAGGGAGTGCTGAGACTAGAACCACCAAATTTAGAAGATCATCAGCTCCAGTGGAGAGCAAGATACAACAGAATGTGGTGGTTGATGACGATGACGAAAAGAGGAAGGCCAGGTTGATGAGGAACAGGGAAAGTGCACAGCTTTCGAGACAGAGGAAGAAGCACTATGTGGAGGAGCTTGAGGAGAAGGTGAGGTCAATGCATTCAACAATTACTGATTTGAGTAGCAAGATTTCGTTTGTCATGGCTGAGAACGCCACTTTGAAGCAGCAATTGGGTATTGGTGGGATGTGCCCTCCTCCACCTGTTCCTGGGATGTATCCTCATGCTCCTCCCATGGCCCACATGCCTTATGCATGGATGCCATGCGCTCCATACGTTGTTAAGCCTCAAGGATCTCAGGTTCCCTTGGTCCCCATTCCAAAGTTGAAACCTCAGCAACCTGCTTCTTCATCAAAGAGTAGGAAGTCTGAGGGTAAGAAGAGTGAGGTGAAAACTAAGAAGGTTGCTAGCATTAGTTTGCTGGGTCTGTTTTTCTTTATACTGCTTTTTGGTGGGCTTGTTCCTAGCGTGGACGTCAAGTTTGGTGGCTTAGTGGGGTATGTTCCTGGTAGGTCTAGTTATGTTACTGATAGGTTCTATGGTGGTCATCAAGGTGGAGGGAAGGTGTGGCCTGTGAATGGTCCTAGGAATGGATCTGAAAGAGATGAGGATATAGGGTATTCCAATGGGAGGTTTAGTATTTCTGACCAGAGGGATTATGAGAGGGGTCGGAAACTAGGAGAGGAAACTCATGAACGGCAAGACCCACGTTGTGATGAATTCGGCCATCGTGGCAATGCGAGTGAGCCCCTCCTTGCTTCTCTGTATGTCCCTAGGAATGATAAGCTGGTGAAGATTGATGGAAACTTGATAATCCATTCTATTCTGGCTGGTGAGAAAGCTATGGCTTCTCAGACTCATGAGACAAAGAAGGACAATAAAGAAACTGGTTTGGTCATTCCTAAGGATTGGGATTCTGCTTTGGCAATTCCCGAAGTTGGAAGGAATAGAGGCCAGCATCCTCATGTGTATACAGTTCCACCTGAGCAGAGGAAGGCTCTTGGTTCTGGTTCAACCAAAACATTAAAGGACCACATGAAATCCTCTGCAAGTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGCCTTGCAGGACCAATGTTAAGTTCAGGCATGTGCACAGAAGTCTTCCAGTTTGATGCCTCTCCAAAACCTGGGTCTATAGTTCCGGCAACATCAGTTGCCAATGTTTCTAAGGATAGCCGCCAGAATGGTACCGCACTTAACAAGACCAGGAACAGAAGAATCCTCCATGGGCTCCCTGGTCACCTTGATGGAACCAGTCTGAACATAACTGAAGACCTTGTAAGGAATTCACAGAATGATCACCTCCATGGTAATAAATCTTCCATGGTGGTTTCAGTGCTTGTTGATCCCAAAGAAGCTGCGGATAGTGATGTTGATGGTGTGATGACTCCAAAATCGCTCTCTCGTATCTTTGTGGTTGTGCTCATTGACAGTGTCAAGTATGTCACATACTCATGTGGTCTTCCACGTTTGTCTCATCATCTAGTGACTGCTTGA 2391 0.4872 MPGPAEQPPQAGDAPSDLAFDDFSSQFDGFPIPSMDALFAENAGGTLNTDAFASDLEFPMDFGDGGDYEITFDDLDNLYIPSDADDFLLPDACNSNGDLILPTNGDLGDCSGKNSDCDAANSDSPESGSCAVAGDQSSSVSRFLNSQSSSESGSCKRDLSPNPRDSADVKDSRFPSHDSDSCGEREESSNGAISSRSSGNGSGSGVYETMNSPSPDCGRYEREISSSHAHAILDQNVKLEDNGKGCDLKRKQENSEGSAETRTTKFRRSSAPVESKIQQNVVVDDDDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTITDLSSKISFVMAENATLKQQLGIGGMCPPPPVPGMYPHAPPMAHMPYAWMPCAPYVVKPQGSQVPLVPIPKLKPQQPASSSKSRKSEGKKSEVKTKKVASISLLGLFFFILLFGGLVPSVDVKFGGLVGYVPGRSSYVTDRFYGGHQGGGKVWPVNGPRNGSERDEDIGYSNGRFSISDQRDYERGRKLGEETHERQDPRCDEFGHRGNASEPLLASLYVPRNDKLVKIDGNLIIHSILAGEKAMASQTHETKKDNKETGLVIPKDWDSALAIPEVGRNRGQHPHVYTVPPEQRKALGSGSTKTLKDHMKSSASDGKMQQWFREGLAGPMLSSGMCTEVFQFDASPKPGSIVPATSVANVSKDSRQNGTALNKTRNRRILHGLPGHLDGTSLNITEDLVRNSQNDHLHGNKSSMVVSVLVDPKEAADSDVDGVMTPKSLSRIFVVVLIDSVKYVTYSCGLPRLSHHLVTA 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60606g00007 796 MobiDBLite consensus disorder prediction 1 20 - -
Stsc60606g00007 796 MobiDBLite consensus disorder prediction 115 159 - -
Stsc60606g00007 796 MobiDBLite consensus disorder prediction 393 418 - -
Stsc60606g00007 796 Gene3D - 287 348 - -
Stsc60606g00007 796 MobiDBLite consensus disorder prediction 221 269 - -
Stsc60606g00007 796 SMART brlzneu 285 349 IPR004827 GO:0003700|GO:0006355
Stsc60606g00007 796 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 287 347 IPR004827 GO:0003700|GO:0006355
Stsc60606g00007 796 FunFam bZIP transcription factor 49 288 350 - -
Stsc60606g00007 796 MobiDBLite consensus disorder prediction 186 211 - -
Stsc60606g00007 796 Coils Coil 312 332 - -
Stsc60606g00007 796 CDD bZIP_HY5-like 290 341 - -
Stsc60606g00007 796 MobiDBLite consensus disorder prediction 161 185 - -
Stsc60606g00007 796 Pfam bZIP transcription factor 289 347 IPR004827 GO:0003700|GO:0006355
Stsc60606g00007 796 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 66 793 - -
Stsc60606g00007 796 SUPERFAMILY Leucine zipper domain 289 347 IPR046347 GO:0003700|GO:0006355
Stsc60606g00007 796 MobiDBLite consensus disorder prediction 618 642 - -
Stsc60606g00007 796 MobiDBLite consensus disorder prediction 111 275 - -
Stsc60606g00007 796 MobiDBLite consensus disorder prediction 479 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60606g00007 Stsc-Chr60606 41347 44764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60606g00007 25 796 bZIP Transcription Factor Family AT2G40950 46.931 7.66e-170 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc60606g00007 bZIP_1 4.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60606g00007 K25783 - gmx:100127362 910.212