Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60605g00004 ATGATATTAAACCGGCCAATATTCTATTGGACCGGAATTTCAATCCTAAGGTTGCGGGGTTTGGCAATGCTTTATAATAGAGATAGCACTCATATATCTATGACTGCAGGAGGAGGAGGCAGGGGAACCCCCGGTTACGCCGCGCCGGAGCTGTGGATGCCGTTTCCTGTGACTCACAAGTGTGATGTTTATAGCTTTGGAATGTTGTTGTTTGAGATCATAGGCCGGAGAAGAAATGTTGATAGTAATGTTCCGGAGAGCCAAGAGTGGTTTCCAATGTGGGTTTGGAGAAAATTTGATGGTGGAGAATTACAAGAGTCAGCATTAGTGTCTGAATTATTGTTGGAGAAACATAAGGTGATGGTAGAGAGAATGGTGAAGGTGGCTTTGTGGTGTGTTCAGTATAGGCCTGAATCAAGGCCTATGATGAGTGCTGTTGTCAAAATGTTGGAAGGCTCTGAAGAAATTCCAGAACCTTCGAATCCGTTTCAGTACTTGATGGACAATGGTTTTGCTACTGCTCATTCAGATCAAGATTCATCAAGTAAGAACACTAGTACAGCTTCAAGTAGTAGTCTGAGTGTTGTGGATTCCAACATTGTATCTGCTACTACTGCAATTCAGAGGCAAAACAAGATCCAAGTATTAGTGTCTAGCTAG 660 0.4288 MILNRPIFYWTGISILRLRGLAMLYNRDSTHISMTAGGGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNVDSNVPESQEWFPMWVWRKFDGGELQESALVSELLLEKHKVMVERMVKVALWCVQYRPESRPMMSAVVKMLEGSEEIPEPSNPFQYLMDNGFATAHSDQDSSSKNTSTASSSSLSVVDSNIVSATTAIQRQNKIQVLVSS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60605g00004 219 Pfam Protein tyrosine and serine/threonine kinase 35 150 IPR001245 GO:0004672|GO:0006468
Stsc60605g00004 219 SUPERFAMILY Protein kinase-like (PK-like) 20 184 IPR011009 -
Stsc60605g00004 219 Gene3D Transferase(Phosphotransferase) domain 1 19 169 - -
Stsc60605g00004 219 ProSiteProfiles Protein kinase domain profile. 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60605g00004 219 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 176 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60605g00004 Stsc-Chr60605 55600 56998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60605g00004 20 190 Receptor kinase-like Gene Family AT1G56120 35.838 1.04e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Stsc60605g00004 PK_Tyr_Ser-Thr 1.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60605g00004 - - gmx:100816921 234.958