Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60603g00005 ATGGCAAGTGAAAAGGAAGCAGGACCAAACAAGGATTCACTTCGTGGATTTGAGGTCATAGACAAGATCAAGTACTTGCTTGAAGAGGAATGCCCTTTAACAGTTTCTTGTGCCGATATCCTTGCAATTGCCGCCCGTGATGCAGTTCAACTGAGAGGAGGACCAAGATGGGAAGTATTGCTTGGAAGAAAAGACTCTCTAGAATCAAGCTTCAGCGGCGCAAACTTGTTGATTCCAGCTCCTAATTCGTCCTTAGAAGCTTTGATCAACAACTTTGCGCAGCAAGGTCTCGACATCGGAGACTTGGTAGCACTATCAGGTAGCCACACCATTGGAAGAGCAAGATGTGTAAGTTTCAGGCAAAGAATCTATGAAGAGAAACAAGAGTATCACTATGGCTATGACCGGTATAATCGTTACACAAGCTTCCGAAGGATCCTAGAGTCCGTGTGCCCGGTTACTGGAAGGGACAACAAATTTGCACCGTTAGATTATGAGACTCCAAAAAGATTTGACAACCACTACTTCATTAATATTCTCCAAGGGAATGGCTTGTTAGGGTCTGATAACGTGTTGATAAGTCAAGATTACGATGGGAAGATAACAAATATGGTTTGGAGTTATGCCTCCAACGAAGAACTTTTCTTCAAGTCGTTTGCTAAATCCGTGATTAAGATGGGAAGCATTAATGTCCTGACTGGAAATGAAGGGCAGATTAGGAAAAATTGTAGGTTCGTCAACACTTAG 747 0.4284 MASEKEAGPNKDSLRGFEVIDKIKYLLEEECPLTVSCADILAIAARDAVQLRGGPRWEVLLGRKDSLESSFSGANLLIPAPNSSLEALINNFAQQGLDIGDLVALSGSHTIGRARCVSFRQRIYEEKQEYHYGYDRYNRYTSFRRILESVCPVTGRDNKFAPLDYETPKRFDNHYFINILQGNGLLGSDNVLISQDYDGKITNMVWSYASNEELFFKSFAKSVIKMGSINVLTGNEGQIRKNCRFVNT 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60603g00005 248 Gene3D Peroxidase, domain 2 79 226 - -
Stsc60603g00005 248 PRINTS Haem peroxidase superfamily signature 35 52 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 PRINTS Haem peroxidase superfamily signature 53 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 PRINTS Haem peroxidase superfamily signature 101 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 PRINTS Haem peroxidase superfamily signature 164 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 ProSitePatterns Peroxidases proximal heme-ligand signature. 101 111 IPR019793 -
Stsc60603g00005 248 ProSiteProfiles Plant heme peroxidase family profile. 1 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 CDD secretory_peroxidase 3 246 IPR033905 GO:0004601|GO:0042744
Stsc60603g00005 248 FunFam Peroxidase 79 226 - -
Stsc60603g00005 248 SUPERFAMILY Heme-dependent peroxidases 2 247 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 PRINTS Plant peroxidase signature 178 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 PRINTS Plant peroxidase signature 34 44 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 PRINTS Plant peroxidase signature 15 28 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 PRINTS Plant peroxidase signature 100 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 PRINTS Plant peroxidase signature 221 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 PRINTS Plant peroxidase signature 53 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 Pfam Peroxidase 2 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60603g00005 248 Gene3D - 3 247 - -
Stsc60603g00005 248 PANTHER PEROXIDASE 72-RELATED 2 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60603g00005 Stsc-Chr60603 9523 11134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60603g00005 1 247 Peroxidase AT2G35380 65.992 3.41e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60603g00005 K00430 - gmx:100778051 435.647