Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60602g00002 ATGATTCTAACTCATCACAACCCTAATCACCTCTTCGCAGATTCACCTCTCAACTCTTCGCTCAGAAACTGCACCCTAATTCCCAACCCTTCCACACGCTTCCGAGTCACGTGCCTCAACTCCTTCGTAATTCACAGGTTCGTTTCGGTTTCCACCCGAACCGCGGGCCCGTTTCGCATCAGAGCCCAAGAATCTGATGCCGCGGTTTCGAAACGCGTTCTTGGCGACTTCGATTTGGATTCGGTGCTCTCCGTTCTGGAACTCGCGTGCCTTGTTTCGTCGGCGGTTGCGTGGGTTGGTTTTGCTGTGATTACGGGTTCGGCGAAGCAGGGGTTCTTGGTGGCGATTGGGGAGAGTAGGGTTAGGGTTGTGGTTGCTGTGTGTGGGGCAGTGATGATGGTTGGTGGGATTTTGATTGGAGCGTGGATTCGGAGGCGGCAATGGAATCGAGTTTGTGGCGGAACGGGGAAGGTGAATTTTGTTGAGAGGATTGAGAAATTGGAGGAGGAATTGAAGAATTCTGCCACTGTAATTAGGGTTTTGTCGAGGCATATAGAGAAATTGGGAACAAGGTTTAGGGTCACTCGCCAAAACTTGAAGGATCCCATAGCTGAGGCTGCAACTCTGGCACAGACGAATTCTGAGGCCACAAGAGCACTTGCAGTGCAATCAGATGTTTTGGAGAAGGAACTTCGCGAAATTCAAAATGTTTTACTAGCAATGCAGCAAAAACAACTTGATCTGATTCTTGCAATTGGGAAGACTACTAAGCTGTGGGAAACCAAACGGGAAACTAGTGAAGAACATGATAGTACATTAGAAACACCTAACTTGGCTGAGGGCGAGGTAAACCAGAAGGAAGTTCACCAAATTTGA 876 0.4874 MILTHHNPNHLFADSPLNSSLRNCTLIPNPSTRFRVTCLNSFVIHRFVSVSTRTAGPFRIRAQESDAAVSKRVLGDFDLDSVLSVLELACLVSSAVAWVGFAVITGSAKQGFLVAIGESRVRVVVAVCGAVMMVGGILIGAWIRRRQWNRVCGGTGKVNFVERIEKLEEELKNSATVIRVLSRHIEKLGTRFRVTRQNLKDPIAEAATLAQTNSEATRALAVQSDVLEKELREIQNVLLAMQQKQLDLILAIGKTTKLWETKRETSEEHDSTLETPNLAEGEVNQKEVHQI 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60602g00002 291 PANTHER TRANSMEMBRANE PROTEIN 21 290 - -
Stsc60602g00002 291 Coils Coil 164 184 - -
Stsc60602g00002 291 Coils Coil 224 244 - -
Stsc60602g00002 291 MobiDBLite consensus disorder prediction 261 275 - -
Stsc60602g00002 291 MobiDBLite consensus disorder prediction 261 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60602g00002 Stsc-Chr60602 5397 8274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60602g00002 9 260 Eukaryotic Initiation Factors Gene Family AT5G65250 42.803 3.89e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60602g00002 - - gmx:100790782 254.603