Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60601g00015 ATGTCGTCTCTGCAATCAAACGTCGATTCCACAAATTCCGAAACGTTGCAACGATCCAATCCCAAGAAGCGCCGCAAAATTGGACACACCAATTCCCCCACCCTCGTTCCATGGAGATCCGATACGCAACAGCGGATCTACTCTTCCAAGCTCGCTGACGCTCTCCGCCACGTCCTCCGTCGGAATCATCCGCCGCCGCCGGTAAAGTCTAATACTGGCCGGGAGGTCCGGGAGACCGCCGACCGAGTCCTCGCTGCCACTGCAAAAGGCCGGACTCGATGGAGTCGCGCTATTCTTGCTAGTCCACTCAACCGGTGGAAGCTCCGGAGGATGCACAAGAAGGTTCACAAGGCTGCCACCGGATTGGGGAAGAGGCCGCCGGAGACTCGCCGGAGGTTGCCGGTGGTACAGAAGAAAGCGCGCCTTCTCAGCCGGTTAGTCCCCGGATGCCGGAAGCTCTCGTTCCCGAACCTTTTAGAAGAAGCCACGGACTACATCTCGGCGTTGGAGATGCAGGTGAGAGCCATGACGGCACTCACCGAGTTACTCGCCGGCGGCACGTCACAGGCCGCAGCTTGA 579 0.5924 MSSLQSNVDSTNSETLQRSNPKKRRKIGHTNSPTLVPWRSDTQQRIYSSKLADALRHVLRRNHPPPPVKSNTGREVRETADRVLAATAKGRTRWSRAILASPLNRWKLRRMHKKVHKAATGLGKRPPETRRRLPVVQKKARLLSRLVPGCRKLSFPNLLEEATDYISALEMQVRAMTALTELLAGGTSQAAA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60601g00015 192 CDD bHLH_AtIBH1_like 130 180 IPR044549 GO:0006355
Stsc60601g00015 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 185 IPR036638 GO:0046983
Stsc60601g00015 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 120 169 IPR011598 GO:0046983
Stsc60601g00015 192 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 39 183 IPR044660 GO:0006355
Stsc60601g00015 192 MobiDBLite consensus disorder prediction 1 17 - -
Stsc60601g00015 192 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60601g00015 Stsc-Chr60601 67469 68501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60601g00015 31 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 50.968 1.55e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60601g00015 - - pcin:129310330 217.624