Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60601g00002 ATGGCACCTCACAAGAGAGCATCATCAAGTGATGAGGGTAATGATGAGAGAGACCTTCAACTCCCTCTTTGTAAACGAAAACCAGCACTTCCAGACACCAGCACTGCTTCTGGTAGTGGTTCCACCAATGACATGGCGTTGCTCTTGGATTCTGCAATTAAGAAAGCGTTACATGAGACGATACCACCTATGCTGCAACAGATGATCCCACCTATTCTAGAACAAATGATTCCACCTATGCTGCAGCGTTACCTATCTTCCCCATGTTATGGAGTATCGGTGAGGCGGAAGATTAGTCCACCAGCTGGTGATGGAGGCAGATCATTGCAGTTATGTCTGATGAAGGGGTTGCCTTCAACCATTTTCACACAGATTAACATCACAGCAGAGGACAGTTCCCCGCTCCAAATTGCAGTCTGTGATGCCACAATTCAGCACCCCAAGGGAGATGGTCCCTGCGTGAAGGTGGAGCTATGTGTACTGAAGGGTGACTTTGAAAGTGAGGATTGGACTTCTGAGGAATTCAATAACAACATAGAAAGTCCAAGGGAGGGAAAAGGACCATTACTCAAGGGAGAAACGGTTATTGTCATGAAGAATGGAGTTGGTTGTTTCAAGAAAGTTGAGTTTACAGATAACAGTAGCTGGACAAGAAGCGGCAAGTTCCGGATTGGATTTAGAGTAGTGCAATCGAATTCTTCCCAGATTGTAGACATCAAAGAAGGAAGAAGTGAGCCTATAAGGGTGAAGGATAAGAGAGGAGTTGCAAATGAGAAACCGGATCGTCCTTCATTGGATGACAAGGTGAGTTGTCTGCATAAGATAGCGAAAAATGGTCCAATCCGCAAGCAATTGTCCTCCAATGGAATCAAAACCGTTAAGGATCTGTTGCGCTTGAATACAACTGACCAAGCTTCACTAAGACAGAAAACCTGCAACATTCCGGGGAGATCATGGGAGAAAATTATTGAGCATGCCAAGTCTTGTGAGTTAGATAATGAGGAGCGCTACGTCTATCACTATTTCACAGGAACGGCAGAGCAACAACCAGCAGCAACACTGATTTTAAATTGCATCTATGAGCCTCTGGAGGTTTCATCTGATGGCCAAAATTTTTACAGCCTAGACTCTCTGAGTTTGGAAGCCAAGCGCTGGGTGGAAACTATAAAGCAGGAAGCATACAAGAACTTGAAGGATTTGAAGCCATTTGGGGGTATCCAATGTGGTGCAGCGAATCAATCTCTGGAAAACTTTGATTTCCCAGTTTCTCAGCAAGGACAAGGGGATATGGTTCAAGTTCAACCATCGGCATCGACAGCATCGTATATTGGTGGAGGAACACAGAGTGTTAGCGAGAAAGTAGGGTGTTCCAGTCAACAAGTGGCAGATCAGCAAGTAACATGGCAAGAGTTTGTTGGTGATAACGGATGTAGCAACATGAACATGAGTGCAATACAGATTGATCAGTTTCCAAATTACTCGGATCCATCATTATACCCGTTTTACTCTGTTGGAGGTGATTATGGGGCAACATCATCCAACGATTCATTCCATAATAACTTAGATGTGTATTATTGGGCAAGCAAAGGTGGGTGCAACACTGTGTGGGCTAAATTCAGAAATGCTGTCACTCGTAATGCTCTTAAATGGGCCATACTCTATGCCGCTAAAAGGAAGGCCAAGCTTGTTGTCCACTATCACCATTGA 1707 0.4446 MAPHKRASSSDEGNDERDLQLPLCKRKPALPDTSTASGSGSTNDMALLLDSAIKKALHETIPPMLQQMIPPILEQMIPPMLQRYLSSPCYGVSVRRKISPPAGDGGRSLQLCLMKGLPSTIFTQINITAEDSSPLQIAVCDATIQHPKGDGPCVKVELCVLKGDFESEDWTSEEFNNNIESPREGKGPLLKGETVIVMKNGVGCFKKVEFTDNSSWTRSGKFRIGFRVVQSNSSQIVDIKEGRSEPIRVKDKRGVANEKPDRPSLDDKVSCLHKIAKNGPIRKQLSSNGIKTVKDLLRLNTTDQASLRQKTCNIPGRSWEKIIEHAKSCELDNEERYVYHYFTGTAEQQPAATLILNCIYEPLEVSSDGQNFYSLDSLSLEAKRWVETIKQEAYKNLKDLKPFGGIQCGAANQSLENFDFPVSQQGQGDMVQVQPSASTASYIGGGTQSVSEKVGCSSQQVADQQVTWQEFVGDNGCSNMNMSAIQIDQFPNYSDPSLYPFYSVGGDYGATSSNDSFHNNLDVYYWASKGGCNTVWAKFRNAVTRNALKWAILYAAKRKAKLVVHYHH 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60601g00002 568 Pfam Calmodulin binding protein C-terminal domain 343 402 IPR046829 -
Stsc60601g00002 568 Pfam Calmodulin binding protein-like N-terminal domain 109 252 IPR046831 -
Stsc60601g00002 568 MobiDBLite consensus disorder prediction 1 42 - -
Stsc60601g00002 568 MobiDBLite consensus disorder prediction 1 23 - -
Stsc60601g00002 568 PANTHER OS02G0177800 PROTEIN 63 495 IPR012416 GO:0005516
Stsc60601g00002 568 Pfam Calmodulin binding protein central domain 264 329 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60601g00002 Stsc-Chr60601 5637 8441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60601g00002 65 400 Calmodulin-binding Proteins AT5G26920 37.941 3.38e-60 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60601g00002 - - aip:107645943 804.283