Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60601g00001 ATGGATAATTCAATAGTAACAGTAGGCCCACTGTCTTCCATTAAGGTCAGGATTTGTGCACTCAAAGGGGAGTTCGGCTCCAATAATAACGGCAGGTGGAGCACAACCGAATTCAAGGACAACATCTTTCAGCAAAGAGAAGATAAAGCCACGTTACTAAAAGGAGAAACGGTTATTACACTGAAGAAAGGAGTTGGTCGCATCAGCAACATCGCCATCACGGATAACTCAAAGCGTACAAGAAGCCGACGTTACAGATTAGGAGCCATTGTTCACTCACCTGCTTCCTCTCAAGAACACGTCGCAGAAGCTGTAAGCAATCCTTTTATGGTCAAGGAAAGCAGAGGTCACTACTCACTACTCAACTATACTAATTAA 378 0.4365 MDNSIVTVGPLSSIKVRICALKGEFGSNNNGRWSTTEFKDNIFQQREDKATLLKGETVITLKKGVGRISNIAITDNSKRTRSRRYRLGAIVHSPASSQEHVAEAVSNPFMVKESRGHYSLLNYTN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60601g00001 125 PANTHER OS02G0177800 PROTEIN 4 118 IPR012416 GO:0005516
Stsc60601g00001 125 Pfam Calmodulin binding protein-like N-terminal domain 3 113 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60601g00001 Stsc-Chr60601 102 479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60601g00001 6 117 Calmodulin-binding Proteins AT4G25800 39.286 1.66e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60601g00001 - - aip:107645946 160.614