LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc605g00007	ATGGGCAAAGAAATCATAATAGAAAAATCACCAGAAATACCAGGAAAGCGTAGTAGATTATGGCTGTGTGAAGATGTAGTTAAAGTTTTAGAAGACAATCAAGGGACTGATGCCATGGAAATCATTTATGTGGAATTTCCCTCATTTAAAGATGTAGAAGTGCAGTGGGATGGAACAGCTTTTAAAGATATGAACAACCTGAAAACACTTATCATAAAAAATGGTAGATTTCCTAAAAGTCCCAAACATCTTCCAAATAGTTTAAGAGTATTAAAATGGTGGAGATATCCTTCAGAGTGTTTTCCATATGATTTTCGACAGGAGAAACTCTCCATACTCAAGTTACTCAATAATCTCTATATGTCATCCCAGTTGGATAGCGTATCCAAGAAGTTGGTGACCTTGAAAGTTTTGAATTTTGACTATAGTGATTCTTTGAAAGAGAAACCTGATATGTCTAATCTTCCAAGTTTACAGAATTTTCCTTTAAAGGATCTGTTGCATGGTTTCACAGTCCTTCCTGAATGCATCCAACAATTTCGCTTTCTAATAGACCTCAAAGTGGATGACTGCAAGCATCTTCTGGAGATTAGGGGGATTTCACCAAACTTGGAACACTTCTCAGCAGTAAACTGCAAATCGTTGAGTCTCGGGTGCACAAGCATGTTACTCAATCAGGAGCTATATGAGAATGGAAACATCAGGTTTACTTTGCCAGGAAGAAGGATACCAAGTTGGTTTGAGAAGTGCAGCAGGGGAGCTTCTATTTCTTTTTGGTTTCGTGGCAAATTCCCTTCCAAAGCTCTTTGCATTGCAATCCTACTCATGGATAAGCAGCCTTCCCCAGTTAGAGTAACACCCATCTTGTGGCCGGTGGGAGTTCAAAATGGATCTATTATATATTTTTTATCTGCTGAGGATAAGTATGAAGTGGTTCCAGCTGAGTCAATTGCAAAAGCGATTAGAGTGCACGTGTTGAAGTGA	984	0.3862	MGKEIIIEKSPEIPGKRSRLWLCEDVVKVLEDNQGTDAMEIIYVEFPSFKDVEVQWDGTAFKDMNNLKTLIIKNGRFPKSPKHLPNSLRVLKWWRYPSECFPYDFRQEKLSILKLLNNLYMSSQLDSVSKKLVTLKVLNFDYSDSLKEKPDMSNLPSLQNFPLKDLLHGFTVLPECIQQFRFLIDLKVDDCKHLLEIRGISPNLEHFSAVNCKSLSLGCTSMLLNQELYENGNIRFTLPGRRIPSWFEKCSRGASISFWFRGKFPSKALCIAILLMDKQPSPVRVTPILWPVGVQNGSIIYFLSAEDKYEVVPAESIAKAIRVHVLK	327

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc605g00007	327	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	1	215	IPR044974	GO:0006952
	Stsc605g00007	327	SUPERFAMILY	L domain-like	55	251	-	-
	Stsc605g00007	327	Gene3D	Ribonuclease Inhibitor	24	258	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc605g00007	Stsc-Chr605	18203	20063	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc605g00007	2	164	WRKY Transcription Factor Family	AT4G12020	29.379	1.22e-14	73.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc605g00007	-		-	gmx:547562	233.417