Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60599g00006 ATGGCTGATTCATCAGGATCATCTTCTAAGAGAATGTGGTGCTCAGTGCCTGAAAAGTTTCAGCTGCATGGAGCAATGTTGGCACTTCAATTTGGATATGCTGGCTTCCATGTTGTTTCAAGGGCTGCCCTTAACATGGGAGTTAGCAAGCTTGTTTTTCCAGTTTATAGGAACATCATTGCCTTGCTTCTTCTCCTTCCCTTTGCATACTTTTTGGAAAAGAAGGAGAGGCCAGCCATGACACTGAACTTCCTCGGCCAGTTCTTTGTTCTGGCACTTGTCGGGATTACAGCAAATCAAGGTTTCTATTTGCTTGGGTTGGAGAACACATCACCTACCTTCGCTTCAGCAATACAGAACTCTGTTCCAGCTATTACATTTCTCATGGCTGCCATTCTTAGGATTGAACAAGTGAGATTAAACAGAAAAGATGGAATATCAAAAGTAGTTGGAACAATCCTATGTGTAATTGGTGCAACAGTGATCACTCTCTACAAGGGTCCAACAATATACTCTCCAAAACCATCAACAACATTATTATTAACACAAACATCATCATTATTGGGAGATGCTACTACTGAAGGCAAAAACTGGACCCTTGGGTGCATTTACCTAATTGGACATTGTTTATCATGGTCTGGTTGGCTTGTGTTGCAAGCACCTGTTCTCAAGAAATACCCTGCAAGACTCTCTGTTACTTCATACACTTGCTTCTTTGGATTATTGCAATTCATTCTCATTGCTTTGATTTTTGAAAGAGATTATCAAGCTTGGGTTTTCCACTCTGGTGCTGAAGCCTTTACAATCTTATATGCGGGAGTGGTGGCATCAGGAATTGCATTTGCAGTACAAATATGGTGCATTGATAGAGGGGGCCCTGTCTTCGTTGCTGTGTATCAACCTGTTCAGACTTTTGTGGTGGCAATCATGGCTTCCATTGCTCTTGGAGAAGAGTTCTACTTGGGAGGGATAATTGGGGCAGTGCTAATTGTGGTTGGACTCTACCTAGTTCTGTGGGGTAAAAGTGAAGAGAAGAGAATTGCACAACTTGCAATTGCATCATCAGATCATAGCATTATTAGGTCTTCAAGTCATGCCAAAGCATCATCACTCACTCAGCCACTAATCCTCTCTTCATCAACAGAGAGTAATGTTTAA 1158 0.418 MADSSGSSSKRMWCSVPEKFQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAMTLNFLGQFFVLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDGISKVVGTILCVIGATVITLYKGPTIYSPKPSTTLLLTQTSSLLGDATTEGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFILIALIFERDYQAWVFHSGAEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASIALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKRIAQLAIASSDHSIIRSSSHAKASSLTQPLILSSSTESNV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60599g00006 385 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020
Stsc60599g00006 385 Pfam EamA-like transporter family 200 338 IPR000620 GO:0016020
Stsc60599g00006 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 343 - -
Stsc60599g00006 385 PANTHER WAT1-RELATED PROTEIN 24 354 IPR030184 GO:0016020|GO:0022857
Stsc60599g00006 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60599g00006 Stsc-Chr60599 45000 49585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60599g00006 1 382 Nodulin-like Gene Family AT1G75500 74.359 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60599g00006 - - gmx:100792395 605.134