Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60598g00002 ATGGGTTGGAAGAGATCTGATTTTGAGGACAAGACTGTGATGAAGATCTATGGAGAAGTTTTATTGGGATTCTTGTTGATCTGCACACTTCAGTTTTCAAGTGCAGAAACTGATCCCACTGATGCTTACATGTTGCATTGGGGTCTCCTCCTATCCCCCTGTGGTCATCCAGTGGGGGAGATCCATGCGGACAAGGGTGGCAAGGAGTTCAATGTAATGAGTTCTGAATGCCGCAAATTTGCAAGGAGAACTGGTGATCTGAGCAACAACAATATTGGGGGAAGTATTCCATCCAATTTGCCAGTTACGCTGAGAAACTTTTTTCTTTCGGCCAACCAGTTCACTGGAAGTATTCCGGACTCTTTATCCTCATTGACTGGACTGACAGACATGTCTCTTAATGATAATCATTTAAGCGGAGAAATACCAGATGCATTCCAGTCACTTCAGCTATTGATCAACTTAGACTTATCTAGTAACAACTTGAGTGGTGAATTGCCTCCATCAATGGAGAATTTATCATCTGCGACTACACTACACTTGCAAAATAATCAACTTTCCGGGACTCTTGATGTTTTACAAGACCTTCCTCTTAAAGATTTGGATATTTCGAACAATCAGTTTAATGGTCCAATACCTCCAAAGTTGCTGAGCATCCCTAAGTTCAGTCAATCTGGAAACCCATTCAATGTTGTTAACTCTACTGCGCCAGCTACTTCTCCACCTCGTTCCCCAGTGGCAGCACCACCAGGAGCACCAGTTCCTAAAACACCAGCTTCCGGAACACCATCTTCCGGAACGCCATCTTCCGGACGTGGACCTCCCAAACAAGCCGATGGACCAACTGCAGCCAAGGAATCAAGTTCTGGGAAATCGAAAAAACACACAAAAAGGGTGGTTTGGATAGTTATTGCTAGCATATTGGGATTCATTATATTGTTACTAGCACTCCTTCTCTTCATGCCAAGATGTGCCAGAAGGGAACGGGTCGACAGAAGATCCAAGAGACATCAAATTGGTGCTATTGGAGGTGACAGACCTCATTCTAGGGATCATGGGGCCTTGGTCGCACCGCCAAGTCAAACAGAGAAAGTAGAGGATATTCGAAGGCCAAAGGAGGATCGCCATGTGGATACTAGGGCACTGGCTGCCATTCCGAAGACTCAAGATGAGCAAGATAAAAATATGCAAAGAATGACTTCAATAGACATGAGTACACTAGATGTCTATTCAATGCCTCCTCCCCCTCCGCCACCACCTCCTCCTCCACCACCACCTCCTCCCCCTCCGCCACTGCCTCCACCTCCTCCTCCAACTACTGACAGGGTGGTTGTTGAACCAACCACATTCCACAAAGGGAGTAATGTCAATAAATCCCCAATACGTTCTCCAATACGTTCCCCAATACGTTCAGTTCCTCCTCCCACTTTCGCTAAATTTTTTAGCATTGCATCCCTTCAACAGTATACAAATAGCTTCTCTCAAGAAAATCTTATAGGAGGTGGCATGCTGGGCACTGTGTACAGGGCAGAGCTTCCTAATGGGAAGGTACTTGCTGTGAAGAAACTTGAAAAGAGAGTTTGCGATAACCAGAAGGAGGAGGATTTTCTTGAATTAGTGAATAGCATTGATAGAATACGACATGTAAATATCGTCGAGCTTATTGGGTACTGTTCGGAGCATGGTCAGAGGCTTCTGATATATGAATATTGCAGTAATGGATCACTCTATGAGGCACTCCACTCAGAGGAGGAATTTAAAACAAGACTCTCATGGAATGCTCGCATCCGGATAGCACTTGGGACAGCTAGGGCCCTAGAGTATTTGCATGAGCTATGTCAGCCACCTGTGATTCACAGAAATTTCAAGTCTGCTAACATTCTTCTCGACGATGACCTATCAGTGCGTCTATCTGATTGTGGGTTGGCTCCATTAATAGCTTCAGGATCCGTCAGTCAGCTATCTGGACAACTGCTAACAGCTTATGGCTATGGAGCTCCGGAATTCGAATCTGGAGTTTACACATACCAGAGTGATGTGTACAGCTTCGGAGTAGTTATGTTGGAACTTTTGACCGGCCGTCAGTCCCATGATAGAACACGTCCTCGGGGGGAGCAGTTTCTGGTCAGATGGGCAGTTCCGCAACTCCATGATATTGATGCATTGTCAAGCATGGTTGATCCTTCTTTGAATGGAGACTATCCCACCAAATCGTTATCAAATTTCGCAGATATTATTTCTCGATGCCTTCAGTCGGAGCCAGAATTTAGGCCTGCAATGTCAGAGGTCGTCTTGTACTTATTGAACATGATAAGGAAGGAGTCCCATCAAAGTGAATCAGATGAAATGTGA 2352 0.4515 MGWKRSDFEDKTVMKIYGEVLLGFLLICTLQFSSAETDPTDAYMLHWGLLLSPCGHPVGEIHADKGGKEFNVMSSECRKFARRTGDLSNNNIGGSIPSNLPVTLRNFFLSANQFTGSIPDSLSSLTGLTDMSLNDNHLSGEIPDAFQSLQLLINLDLSSNNLSGELPPSMENLSSATTLHLQNNQLSGTLDVLQDLPLKDLDISNNQFNGPIPPKLLSIPKFSQSGNPFNVVNSTAPATSPPRSPVAAPPGAPVPKTPASGTPSSGTPSSGRGPPKQADGPTAAKESSSGKSKKHTKRVVWIVIASILGFIILLLALLLFMPRCARRERVDRRSKRHQIGAIGGDRPHSRDHGALVAPPSQTEKVEDIRRPKEDRHVDTRALAAIPKTQDEQDKNMQRMTSIDMSTLDVYSMPPPPPPPPPPPPPPPPPPPLPPPPPPTTDRVVVEPTTFHKGSNVNKSPIRSPIRSPIRSVPPPTFAKFFSIASLQQYTNSFSQENLIGGGMLGTVYRAELPNGKVLAVKKLEKRVCDNQKEEDFLELVNSIDRIRHVNIVELIGYCSEHGQRLLIYEYCSNGSLYEALHSEEEFKTRLSWNARIRIALGTARALEYLHELCQPPVIHRNFKSANILLDDDLSVRLSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFESGVYTYQSDVYSFGVVMLELLTGRQSHDRTRPRGEQFLVRWAVPQLHDIDALSSMVDPSLNGDYPTKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIRKESHQSESDEM 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60598g00002 783 SUPERFAMILY Protein kinase-like (PK-like) 467 767 IPR011009 -
Stsc60598g00002 783 MobiDBLite consensus disorder prediction 242 257 - -
Stsc60598g00002 783 ProSiteProfiles Protein kinase domain profile. 493 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60598g00002 783 MobiDBLite consensus disorder prediction 230 292 - -
Stsc60598g00002 783 MobiDBLite consensus disorder prediction 407 469 - -
Stsc60598g00002 783 MobiDBLite consensus disorder prediction 363 378 - -
Stsc60598g00002 783 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 571 781 - -
Stsc60598g00002 783 MobiDBLite consensus disorder prediction 335 352 - -
Stsc60598g00002 783 Pfam Protein tyrosine and serine/threonine kinase 496 765 IPR001245 GO:0004672|GO:0006468
Stsc60598g00002 783 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 73 241 - -
Stsc60598g00002 783 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 462 570 - -
Stsc60598g00002 783 MobiDBLite consensus disorder prediction 258 272 - -
Stsc60598g00002 783 Gene3D Ribonuclease Inhibitor 70 239 IPR032675 -
Stsc60598g00002 783 MobiDBLite consensus disorder prediction 335 378 - -
Stsc60598g00002 783 MobiDBLite consensus disorder prediction 410 442 - -
Stsc60598g00002 783 SUPERFAMILY L domain-like 80 220 - -
Stsc60598g00002 783 PANTHER LEUCINE RICH REPEAT KINASE 2 86 774 - -
Stsc60598g00002 783 Gene3D Transferase(Phosphotransferase) domain 1 571 783 - -
Stsc60598g00002 783 Gene3D Phosphorylase Kinase; domain 1 467 570 - -
Stsc60598g00002 783 MobiDBLite consensus disorder prediction 450 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60598g00002 Stsc-Chr60598 14761 21364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60598g00002 79 778 Strubbelig Receptor Gene Family AT4G03390 60.820 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc60598g00002 PK_Tyr_Ser-Thr 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60598g00002 - - ahf:112737625 1156.74