Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60595g00004 ATGGGAATATATCTAAGCACTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACCGTCTTAAATATGGTTTATCTTCCATGCAAGGCTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATACTGATCTGGATGCTTCCACTTCATTTTTTGGTGTCTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCAAAGTTTCTTCACCAACAGGTGCTCAGAAGTGAAGAATATGCAGCTGGAGATATAGGAACCTCTCTTCAGAAAGCATTTTTAAGAATGGATGACATGATGCGTGGTCAAAGGGGATGGAGGGAATTATCAGTCCTGGGGGATAAGATAAACAAGTTTACTGGGATGATAGAAGGGCTGATTTGGTCTCCAAAAGGTACTGATGTAAGTGACCAAGTTGACGATTGGGCTTTTGAGGAGGGACCTCATGCTGATTTTGCTGGCCCAACTTCAGGAAGCACTGCCTGTGTTGCTGTTATTAGAAACAACCAAGTTTTTGTTGCAAATGCTGGTGATTCGCGTTGTGTAATTTCTCGAAAGGGTCAGGCATACAATTTGTCTAGAGATCACAAACCTGAACTTGAGATTGAAAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCACGCCGGACGAGTTAATGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAGCAGAATAAATTTCTTCCTGCTGAAAAACAAATTGTAACTGCCAATCCAGATATAAACACTGTTGACCTTTGTGAAGATGATGAATTCATGGTCCTAGCTTGCGATGGCATATGGGATTGCATGTCAAGCCAACAGTTGGTAGATTTTATTCATGAACAATTGCGCTCGGAAACCAAGCTTTCTGTAGTGTGTGAAAGAGTACTCGATCGTGCACCACCAGAAGAGCAGCAATCCTCTGCAAACGAAAAAGCTGAAGAAGCTGAAGAACCAAAAGTGGATAGTAGTGAAAGTTAG 1005 0.4129 MGIYLSTPKTEKFSEDGENDRLKYGLSSMQGWRATMEDAHAAYTDLDASTSFFGVYDGHGGKVVAKFCAKFLHQQVLRSEEYAAGDIGTSLQKAFLRMDDMMRGQRGWRELSVLGDKINKFTGMIEGLIWSPKGTDVSDQVDDWAFEEGPHADFAGPTSGSTACVAVIRNNQVFVANAGDSRCVISRKGQAYNLSRDHKPELEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVDLCEDDEFMVLACDGIWDCMSSQQLVDFIHEQLRSETKLSVVCERVLDRAPPEEQQSSANEKAEEAEEPKVDSSES 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60595g00004 334 PANTHER PROTEIN PHOSPHATASE 2C 18 308 IPR015655 GO:0004722|GO:0006470
Stsc60595g00004 334 ProSiteProfiles PPM-type phosphatase domain profile. 23 334 IPR001932 -
Stsc60595g00004 334 MobiDBLite consensus disorder prediction 316 334 - -
Stsc60595g00004 334 SUPERFAMILY PP2C-like 3 308 IPR036457 -
Stsc60595g00004 334 CDD PP2Cc 23 308 IPR001932 -
Stsc60595g00004 334 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Stsc60595g00004 334 Pfam Protein phosphatase 2C 155 308 IPR001932 -
Stsc60595g00004 334 SMART PP2C_4 11 325 IPR001932 -
Stsc60595g00004 334 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Stsc60595g00004 334 MobiDBLite consensus disorder prediction 308 334 - -
Stsc60595g00004 334 Gene3D - 1 322 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60595g00004 Stsc-Chr60595 17735 21471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60595g00004 1 308 PP2C-type Phosphatase Gene Family AT2G25070 78.247 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60595g00004 K17499 - qsa:O6P43_015776 586.645