Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60594g00011 ATGGCTGCCAGCTCCAGAAGAAAGCTAACTCTTAACACTGTTTCAGTGAAGCTTGGTTGTGGAAGCTGCAGAACAAGAACAAAACCAAAGCTTCTTCTTCACTTCCTCTTCAATCGAAAACCAAATAATCATCATCATAATCATAATAACCCCACTTACACAAAACACCATAACAATTCTACTCCTTCTTCTTCCTCTTCCTCTTCTTTCTATTACTATAACTATCATGACACAACAACAACAACAACAACAACATTCTCTTCTTGCTACGATGATACCATGAAAATGAATCATCATCATCATCATCATCAGAAGAAGAAGAAGAAGAAGAAGAGTAATGATGCTACTGTTAAGGGTTTTGGAAGTGTTGCTGTGGAGAAAGATTCTGAGGACCCTTTCTTGGATTTCAAGAACTCCATGCTCCAAATGATCATTGAGAATGAGATTTATAACAAGGAAGATCTTAGCCAGCTTTTGAAGTGTTTCCTTCAGCTTAATTCAACTCATCACCATCCT 516 0.374 MAASSRRKLTLNTVSVKLGCGSCRTRTKPKLLLHFLFNRKPNNHHHNHNNPTYTKHHNNSTPSSSSSSSFYYYNYHDTTTTTTTTFSSCYDDTMKMNHHHHHHQKKKKKKKSNDATVKGFGSVAVEKDSEDPFLDFKNSMLQMIIENEIYNKEDLSQLLKCFLQLNSTHHHP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60594g00011 172 ProSiteProfiles OVATE domain profile. 125 172 IPR006458 -
Stsc60594g00011 172 NCBIfam uncharacterized plant-specific domain TIGR01568 123 171 IPR006458 -
Stsc60594g00011 172 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 46 171 IPR038933 GO:0045892
Stsc60594g00011 172 Pfam Transcriptional repressor, ovate 129 172 IPR006458 -
Stsc60594g00011 172 MobiDBLite consensus disorder prediction 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60594g00011 Stsc-Chr60594 77825 78340 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc60594g00011 Ovate 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60594g00011 - - pvy:116143826 125.176