Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60592g00002 ATGAGCAATAAGATATTGCCATTAGTGGGAATGGTGATGGCTATGCTGCTGCAAAGTGGTAGCATGGTTGTTATAAAAGCAGCCATGAATGATGAGATGAACAAATATGTCTTGGTTGTTTATTCTTTGGCACTCTCCACTCTCCTCCTTCTCCCCTTTCCCTTCCTTCTACCCAGGTCAGAACGTCCTCCTCTGAGTTTCTCTACACTTTGCAGCCTATTTTTGCTTGCTCTATTTGGAAGTTCAGGACAGATATTCGCTTATGTCGGCATAGATCTTAGCTCACCAACTCTTGCCTCTGCCATGCTCAACCTTATTCCAGCTTTAACTTTTGTACTTGCTCTCTTATTCAGGATGGAAAAAGTTTATTGGGGACACTTGAGCATCCATGCTAAAGTCATAGGAACTGTGGTATCCATCGGTGGAGCTTTTGTTGTGATATTATATAAGGGCCCACCAATCTTCAAGGCACACTTCTCCTCACTCTCTTCTTCATCACTCACATTCTCATCATCATTTTCATCCCCACAACAATTCAATTGGATCTTGGGAGGCTTTTTCTGTGTTGCTGATTCTTTGGTATCTTCTCTCTGGTATATATATCAGGCATCAGTAATAAGGAAATACCCTGCAGTAATGGTGACAGTGTTCTTCCAAGTATTATTTTCAACCATTCAATGCTCAATATTTGCATTAATTGCAGTTAGAGACCGAAGTGCATGGCAGCTGAAGCTAGACACAGGGTTGATTGCAATATTTTACCAGGCAATAGCTGCAACAGCGTTACGGTACCTGTTATGCACTTGGTGCGTGCAAAGAGCTGGACCATTTTTCTGTTCTATGTTCAAACCTATTTCAATCATCTTCACTGTTATCATGGGTGCTCTCTTTCTTGGTGATGATTTTTACCTTGGAAGCTTGATTGGTACAGTTATAATCGTAATAGGATTTTATGCTGTAATGTGGGGAAAGGCCACAGAAGAGAAAGGTATCATAAATAATGATGAAGAGAGGTTGGAGTCAACGTGCCATAATATTCCTCTCTTACATGACAAAGATGTTACAATTTAA 1071 0.4062 MSNKILPLVGMVMAMLLQSGSMVVIKAAMNDEMNKYVLVVYSLALSTLLLLPFPFLLPRSERPPLSFSTLCSLFLLALFGSSGQIFAYVGIDLSSPTLASAMLNLIPALTFVLALLFRMEKVYWGHLSIHAKVIGTVVSIGGAFVVILYKGPPIFKAHFSSLSSSSLTFSSSFSSPQQFNWILGGFFCVADSLVSSLWYIYQASVIRKYPAVMVTVFFQVLFSTIQCSIFALIAVRDRSAWQLKLDTGLIAIFYQAIAATALRYLLCTWCVQRAGPFFCSMFKPISIIFTVIMGALFLGDDFYLGSLIGTVIIVIGFYAVMWGKATEEKGIINNDEERLESTCHNIPLLHDKDVTI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60592g00002 356 PANTHER WAT1-RELATED PROTEIN 7 335 IPR030184 GO:0016020|GO:0022857
Stsc60592g00002 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 325 - -
Stsc60592g00002 356 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Stsc60592g00002 356 Pfam EamA-like transporter family 10 147 IPR000620 GO:0016020
Stsc60592g00002 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60592g00002 Stsc-Chr60592 15311 21242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60592g00002 2 339 Nodulin-like Gene Family AT5G40240 39.883 2.01e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60592g00002 - - gmx:100792109 435.261