Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60591g00013 ATGGTGGGCGAGCCTTTCTCTCCAACACCTTTCAATCTCAATGGAATCCTGGGCGGTTATGCTTCAATACAAGAACACCATCTTCTTCACTTTCAACTGCAACACAACCCCACCACCAATAACATCTCAACAATAATAATGGAGTTTCTTGGAGAACAAGACATGACCATGAATAATAGTAATAACAATCATAATCATAATCCTATCCCTCAGCAGCATGATCATAAACAAGATGATTTCAAGTTTGACAACTTGGTCTTAGAAGAAGACTTCACCTTTTACCCTGATCCTCAAAAGACACAACCGCCATTATTGCTGCCACAAAAGCATGTTGCACCGTCGCCACGGCCGCCTCCTTCTTTGGCATCATCATGGGAGCTTCTCAGCAATTACGGAAGCAGATTCCAGAGGCTAAGACGGAGCAGTGCCGGCGCTGAAGCTAAAACAACCACCGCCGGCATTGGCCCCAAGAAGTTATCAACAGAGGAAATAGTAAGATTGGCAGGAGCAAGGTACGTGCAGTACTCTTCACAATGGCAAGAAAATTGGTGCATGCCCATGTTTCCTTATGCCCAAATTGGTAATTTCTTGATGTTGTCTGAGGAGGAAAACAAGGACATTGATCTTGCCCAACTTCTTCTAGCTTCAGCTGATAAGATTGGGTCCCAACAATTCGAACGTGCTAATTCATTGCTCCTCCAATGCCAATGGAGTTCTTCAAATGCTGGCAACACAGTTCAGAGATTCGTCTTCCATTTCTCTTCTGCACTCAGAGAAAGGCTAAATAGAGAGATCGGAGGGATTGCGTTACAGAGGAATTCGCAGATGGAACTCATCGAAGCTTTGCTAATGGATCATAACTCAGCCATTACATGCCATCAGAAGCTACCCTTTAATCAAGTGATACAATTTGTTGGTGTTCAAGCTATAGTGGATCATGTTGCATCGAAAACCAAGATTCATTTGATTGATCTTGCTCTTGGATATGGACTAATGGCTACAGTTCTTATACAAGCTCTGGCGGAGCGAAACGAGAAGCCGGTCGAGCTTCTTAAGATAACAGCAGTTGGTTATGGAAGCAAGAGCGTGCTTGATGAGGCGGGGAGGAGGTTGGTGAGTTTTGCTAAGTCCTTGAACTTGAGAATCTTGTTCAAGACAGTTTTTGTTGAAGACATTAGAGAGTTAAGGGAAGATGATTTCGAGATTGAAAGCGATGAAGGTGTTGCTGTTTACTCTCCCAAGATCCTTAGGACTTTGGTTTCAAGTCCTGATTCATTGGACAACTTGATGAGGGTGATAAGGAAGATCAAGCCGGCGATTATGCTTGTTAATGAGATTGAAGCAAACCACAACTCTCCTTTGTTTGTGAATCGATTCATTGAGTCATTGTTTTACTTGTCAGCGTATTTTGATTACCTCGGAACATGCCTGGGTCGGGATAATGAGAGCAGGATGAGAATGGAAGCAATAGTATCGGAAGGAATTCGAAACAATGTTTCATTGGATGATAAAGAGAGGGAAATTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTTTTTGCGAGGTTTAGAATGGTGGAAACTGAATTCAGTGAGTCATCGTTGTACCAAGACGAAACTGCCATAACGGGGTGCAGGATGAAACTGCCAGAACGGGGTGCAGAGGAAAGCTGCCGCGCGCGCATAGAGTTTGGCGAAACTGCCGAAGGAGTGAGTGCAGACGGAACTGCAACAAGGAGATTGACGAAACTGCTGGAGATGTGGAGACGTAACTCCCATGGAAAGACAGGAGAAACTTTCAGAACGAAAACACAAAAGTACCACAACGAATGA 1833 0.4386 MVGEPFSPTPFNLNGILGGYASIQEHHLLHFQLQHNPTTNNISTIIMEFLGEQDMTMNNSNNNHNHNPIPQQHDHKQDDFKFDNLVLEEDFTFYPDPQKTQPPLLLPQKHVAPSPRPPPSLASSWELLSNYGSRFQRLRRSSAGAEAKTTTAGIGPKKLSTEEIVRLAGARYVQYSSQWQENWCMPMFPYAQIGNFLMLSEEENKDIDLAQLLLASADKIGSQQFERANSLLLQCQWSSSNAGNTVQRFVFHFSSALRERLNREIGGIALQRNSQMELIEALLMDHNSAITCHQKLPFNQVIQFVGVQAIVDHVASKTKIHLIDLALGYGLMATVLIQALAERNEKPVELLKITAVGYGSKSVLDEAGRRLVSFAKSLNLRILFKTVFVEDIRELREDDFEIESDEGVAVYSPKILRTLVSSPDSLDNLMRVIRKIKPAIMLVNEIEANHNSPLFVNRFIESLFYLSAYFDYLGTCLGRDNESRMRMEAIVSEGIRNNVSLDDKEREIRNVKIDVWRRFFARFRMVETEFSESSLYQDETAITGCRMKLPERGAEESCRARIEFGETAEGVSADGTATRRLTKLLEMWRRNSHGKTGETFRTKTQKYHNE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60591g00013 610 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 160 537 IPR005202 -
Stsc60591g00013 610 ProSiteProfiles GRAS family profile. 200 589 IPR005202 -
Stsc60591g00013 610 Pfam GRAS domain family 210 546 IPR005202 -
Stsc60591g00013 610 MobiDBLite consensus disorder prediction 57 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60591g00013 Stsc-Chr60591 60022 62740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60591g00013 197 521 GRAS Transcription Factor Family AT1G66350 28.528 1.06e-33 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc60591g00013 GRAS 3e-61 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60591g00013 - - aip:107615215 721.465