Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60591g00012 ATGGAGTTACCCGAAGACATGAATCCTGTTCACAATAATGAGCAACACCAACAGCAGAAACAAAAAGTTAATGAGAAGCAGATTCCATCACCATTGGATCTCTTGAGTAACTATGCAAGTAGTTTCATCAGGTTAAGTGGCACAAACTTATTAAGAGTAAGACCATGCGGCACTGACCCACAGAAGAAGTCAACTGAGGATATCATAAGAATCGCAGGAGTTAAGTATTTGCAGTATTCCTCACAATCTCAAAATAATTATTTTCAGATCCCTGAGGACGAAGAAAACAAGGACGTTCAGCTCGCTCAATTTCTTTTTGCTGCTCTTGAGAGGATAGTGTGCCGCCAATTCGAACACGCGAATTCGTTGCTCCTTCATTGTTGCCACTGGAACTATGGAAACTCAGTTCAGAGGACAATCTTCCATTTCTCTCAAGCGCTCAGGGAAAGGATCAAACAAGAAACAGGATCAGGGATGGCAACGATACCGAGACTACAGAGGAACCCGATTGAAGAGTTGCAAAGGGATCACAATGCTGCGGTTGCTTGCCATAAAAAACTTCCTTTTAATCAAGTGATGCAGTTTGTTGGTTTGCAAACGATTATAGAGTATCTTGCTTCACATACCAAAATACATATGATCGATCTCGCTCTTGGATACGGCTTGATGGCCGCGACTCTCATGGAAGCTCTGGCAGGGCGCCAGGAGAACCCGGTCGAGCTTCTCAAGATAACTGCTGTCGTGTATGGAGACAGCAGGGGAGGAGTGATAGATGAGACTGGAAAGAGGTTGGTGAGTTTGGGTGAGTCATTGAACTTGCGCTTTTTGTTTAAGACAGTTTTTGTTAGAGACATCAATGAACTAGACACGGATGATTTTGAAGTAGAAAAGGATGAAGCTGTGGTTGTGTATTCTCCCAATTTCCTAAGGACTTTGATTTCATTCCCTGATTCCTTGGACAAGTTGATGAGAGTAATAAAGAAGATCAAACCGGGTTTGATGATTGTGCTTGAGGTTGAAGCAAATCACAATTCTATTTCCTTTGTGAACCGTTTCATTGAGTCGTTGTTCTTCTTCTCTGCATTGTTTGACTGCATTGAAACATGCCTGAATCAAGATGATGAGAGCAGGATGAGAGTGGAAACGATTTTATCGGAAGGGATAAGGAACATTGTTGCATTCGATGAGAGAGAGAGGATACTTAGGAATGTGAAGATTGATGTTTGGAGAAAATTCTTTACTAAACTTAGAATGCAAGAAATTAAAATTAGCGAGTCATCAGTGTACCAAGGTAATTTGGTTGTGAAAAAGCTTGGGTTAAGTGATATTTGCACCATAGAGAAACAAGGGAAGTGTCTGATATTAGGATGGAAGGGGACTCCAATTCATTCAATATCAGCATGGAAGTTTATATGA 1416 0.4124 MELPEDMNPVHNNEQHQQQKQKVNEKQIPSPLDLLSNYASSFIRLSGTNLLRVRPCGTDPQKKSTEDIIRIAGVKYLQYSSQSQNNYFQIPEDEENKDVQLAQFLFAALERIVCRQFEHANSLLLHCCHWNYGNSVQRTIFHFSQALRERIKQETGSGMATIPRLQRNPIEELQRDHNAAVACHKKLPFNQVMQFVGLQTIIEYLASHTKIHMIDLALGYGLMAATLMEALAGRQENPVELLKITAVVYGDSRGGVIDETGKRLVSLGESLNLRFLFKTVFVRDINELDTDDFEVEKDEAVVVYSPNFLRTLISFPDSLDKLMRVIKKIKPGLMIVLEVEANHNSISFVNRFIESLFFFSALFDCIETCLNQDDESRMRVETILSEGIRNIVAFDERERILRNVKIDVWRKFFTKLRMQEIKISESSVYQGNLVVKKLGLSDICTIEKQGKCLILGWKGTPIHSISAWKFI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60591g00012 471 Pfam GRAS domain family 103 469 IPR005202 -
Stsc60591g00012 471 ProSiteProfiles GRAS family profile. 92 469 IPR005202 -
Stsc60591g00012 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 85 464 IPR005202 -
Stsc60591g00012 471 MobiDBLite consensus disorder prediction 1 25 - -
Stsc60591g00012 471 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60591g00012 Stsc-Chr60591 56812 58227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60591g00012 93 470 GRAS Transcription Factor Family AT1G66350 27.822 1.56e-46 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc60591g00012 GRAS 3e-70 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60591g00012 - - aip:107615215 536.569