Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60591g00009 ATGAAGTTATTTGATGACGTGAATCTTGTTCCAAATAATGAGCAACGGAATGAATGCCATGATGTCAACGAGCAAGAGCATCAAGAGAATCAATCAGTGGGAAAAACAAGTTCACAACAACTTGCTAGATATGTTAGTGACAAGCAGCAGATCCCACTATTTCCATCTTCGGCACCATCATCGGAGATTCTAAGAAATTATGAGAACAAGTTCAGGAGGTTAAGGGGGAAAAGATTATGCAGCTCCGAAACTAATAGCATTGGTCAACAAAAGATATCGACAGAGGAGATAATGAGAGTGGCAGGAGCTACGTATATTCAGTACTCTTCACAATGGCAAAATGGTTTTATCATCTCTATGCACCCATATGAATCCAGTTTTATGTGTTTGCCGGACAAGGGAAAAAAGGATGTTGAGCTTGCTCAGTTTCTTTTCGCTGCTGCTGAGAGAGTAGGCTGCCAACAATTTGAACGCGCTCGCTCATTGCTCCTCCATTGCCAGAGCAATTCATCGTCTCTTGGGAGCTCAGTTCAGAGAGTCGTCTTTCATTTCTCTCAAGCACTCAGAGAAAGGCTCATCAAACAAATCGGAGGAGGCGTGACAACTACGGCACTTTCAAGGAATATGACAAGGGACAGGATTGAAGAGTTTCGAAGGGATTACAAATCCTCCCTTACATGCCATCAAAAGCTTCCCTTCAATCAAGTGGCGCAGTTCATCAGCGTACAAACCATAGTGGAGCACACTGCATCAAAAATCAAGATTCATTTGATAGATCTTTCGCTCGGGTACGGTTTAATGGCCACGGTTCTCATGCAAGCGTTGGTTGAGCGTAAGGAAAAGCCGGTCGAGCTTCTCAAGATAACCGCCGTTGGATATGGCGGCCGCCGGGGGGTGCTAGATGAGGCAAGGAGGAGGTTGGTGAGTTTTGCTGAGTCACTAAACTTGCCATTTTCGTTTATGATAGTTATTGTTGAAGACATCAAAGAAATTAGCGAAGAACTTTTCGAGATTGAAGATGATGAAGTTGTGGCTGTGTATGCTCCCAATTACTTGAAGAATTTGATGGGAAGTCTTGATTCCTTAGATCACTTGATGAGAGTGATAAGGAAAATAAAACCAGCTATAATGGTTGTGGTTGAGGTTGAAGCGAGTTTGAATTCTACTTCCTTTGTGAATCGATTCATTGAATCATTGTTCTTTTACTCTGCATTATTTGACTCCACTGAAACATGCTTGAGTCAAAATGATGAGAGCAGGATGAGACTAGAATCAGTTTTATCAGAAGGGATAAGAGACCTTATTGTATTCGATGACACAGAAAGGACAGTTAGGAATGTGAAGATAGAAGTTTGGAGAAGGTTCTTTGCTAGATTTAAAATGGTGGAAATTGGATTCAGTAAGTCATCAGTGTACCAAGGTAACATGATTTTGAGAAAGTTTGGGTGTAGTAATATTTGCACCATTGTGAAGAATGAGAAGTGTTTGGTTATTGAATGGAAGGGTACCCCAGTGCACTCAATTTCAGCATGGAAGTTTCATTAA 1545 0.4149 MKLFDDVNLVPNNEQRNECHDVNEQEHQENQSVGKTSSQQLARYVSDKQQIPLFPSSAPSSEILRNYENKFRRLRGKRLCSSETNSIGQQKISTEEIMRVAGATYIQYSSQWQNGFIISMHPYESSFMCLPDKGKKDVELAQFLFAAAERVGCQQFERARSLLLHCQSNSSSLGSSVQRVVFHFSQALRERLIKQIGGGVTTTALSRNMTRDRIEEFRRDYKSSLTCHQKLPFNQVAQFISVQTIVEHTASKIKIHLIDLSLGYGLMATVLMQALVERKEKPVELLKITAVGYGGRRGVLDEARRRLVSFAESLNLPFSFMIVIVEDIKEISEELFEIEDDEVVAVYAPNYLKNLMGSLDSLDHLMRVIRKIKPAIMVVVEVEASLNSTSFVNRFIESLFFYSALFDSTETCLSQNDESRMRLESVLSEGIRDLIVFDDTERTVRNVKIEVWRRFFARFKMVEIGFSKSSVYQGNMILRKFGCSNICTIVKNEKCLVIEWKGTPVHSISAWKFH 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60591g00009 514 ProSiteProfiles GRAS family profile. 131 512 IPR005202 -
Stsc60591g00009 514 MobiDBLite consensus disorder prediction 1 39 - -
Stsc60591g00009 514 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 91 501 IPR005202 -
Stsc60591g00009 514 Pfam GRAS domain family 141 512 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60591g00009 Stsc-Chr60591 41159 43548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60591g00009 132 514 GRAS Transcription Factor Family AT1G66350 30.077 1.09e-44 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc60591g00009 GRAS 3.1e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60591g00009 - - aip:107615215 565.844