Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60591g00008 ATGAAGTTATTTGGTGATGACACGAACCATGTTCCTAACAGTGAGCAAGAGCAAGAGAATCAACCAGTGGGAAACACGAGTTCAAATGACAATCTCAAGATCTCACGATTTCCATCTTTGGTAGCATCATCGGAGATCCTAAGAAATTATGCAGACAGCTTCAGGAGGTTAAGGGGCAAAAGATTAAGCACTACTGAAACTAGCGTTTGTCCACAAAAGATGTCAACTGAGGAGACAATAAGAGTAGCTGGAGCTACATATATTCGGTACTCTTCACAATGGCAACATGGTTTTTCAATCTCTATACACCCATATGAATCCAGTATCATGTGTTTGCCCAGCGAGGAAAACAACGAAGACGTTGAGCTTGCTCGATTTCTGTTTGCTGCTGCAGAGAGAGTAGGGTATCAACAATTCGAACGCGCTAACTCATTGCTCCTCCATTGCCATAACAATTCATCATCAGTTGGCAGCTCAATTCAGAGACTGGTCTTCCATTTCTCTCAAGCACTCAGAGAAAGGCTCATCAAACGAATCGGAGGAGGAACCACCACCACGACGGAACTACCAGGGAACATGACAAGGCACCGGATCGAAGAGTTTCGAAGGGATTACAAATCAGTGTTTACATGCCATCAAAACCTTCCTTTCAATCAATTGACACAGTTCATTAGCGTACAAACCATAGTGGAGCATGTTGCTTCACAAACCAAAATACATGTCGTAGATTTCGCACTCGGATACGGATTGATGACAACAGTTCTCATGCAAGCTTTGGTTGACCGCAAGGGAAAGCCGGTCAGGCTTCTAAAGATAACTGCCGTTGGATATGAAGGTTGGAGGGAGGTTCTAGAAGAGGCAGGGAGGAGGTTGGTGAGTTTTGCTGAGTCGCTAAACTTGCCGTTTTCGTTTATGATAGTTATTGTTGAAGACATCAAAGAAATAAGCAAAGAGCTTTTCGAGATTGAAAATGATGAAACACTGGCTGTGTACGCTCCCAATTACTTGATGAATTGGATGGGGAGTCTTGATTCGTTGGATCACTTGATGAGAGTGATAAAGAAGATGAAACCAGCTATAATGCTTGTGGTTGAGGTGGAAGCGAGTCTCAATTCTACTTCCTTTGTGAATCGATTCATTGAATCGTTGTTCTTCTACTCAGCAGTATTTGACTCCACTGAAACGTGTTTGAGTCAAAACGATGAGAGCAGGATGAGACTGGAATCAGTTTTATCAGAAGGGATACGGAATGTTGTTGCATTTGATGACACAGAAAGGACAGTTAGGAATGTGAAGATTGATGTTTGGAGAAGGTACTTTGCTAGATTTAAGATGGTGGAAGTTAGATTCAGCAAAACATCATTGTACCAAGGTAACATGATTATCAGAAAGTTTGGGTGTAGTAATACATGTACCATAGTGAAGAATGAGAAGTGTCTGATTATTGAATGGAAGGGTACCCCAGTCCACTCAATTTCAGCCTGGAAGTTTCGTCATCGTTGA 1503 0.4218 MKLFGDDTNHVPNSEQEQENQPVGNTSSNDNLKISRFPSLVASSEILRNYADSFRRLRGKRLSTTETSVCPQKMSTEETIRVAGATYIRYSSQWQHGFSISIHPYESSIMCLPSEENNEDVELARFLFAAAERVGYQQFERANSLLLHCHNNSSSVGSSIQRLVFHFSQALRERLIKRIGGGTTTTTELPGNMTRHRIEEFRRDYKSVFTCHQNLPFNQLTQFISVQTIVEHVASQTKIHVVDFALGYGLMTTVLMQALVDRKGKPVRLLKITAVGYEGWREVLEEAGRRLVSFAESLNLPFSFMIVIVEDIKEISKELFEIENDETLAVYAPNYLMNWMGSLDSLDHLMRVIKKMKPAIMLVVEVEASLNSTSFVNRFIESLFFYSAVFDSTETCLSQNDESRMRLESVLSEGIRNVVAFDDTERTVRNVKIDVWRRYFARFKMVEVRFSKTSLYQGNMIIRKFGCSNTCTIVKNEKCLIIEWKGTPVHSISAWKFRHR 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60591g00008 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 101 485 IPR005202 -
Stsc60591g00008 500 MobiDBLite consensus disorder prediction 1 31 - -
Stsc60591g00008 500 MobiDBLite consensus disorder prediction 9 31 - -
Stsc60591g00008 500 ProSiteProfiles GRAS family profile. 114 496 IPR005202 -
Stsc60591g00008 500 Pfam GRAS domain family 125 496 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60591g00008 Stsc-Chr60591 38664 40605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60591g00008 108 497 GRAS Transcription Factor Family AT1G66350 27.621 6.93e-45 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc60591g00008 GRAS 1.5e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60591g00008 - - aip:107615215 520.39