Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60585g00003 ATGGCAAGTAGAAATGGATTAGCAAAAGTTATAGGAACCATTGCCAGTGTTGGTGGTGCCACCATTATTACTCTATACAAAGGTCCTCCTCTTCTTCACCAAACACATGGAAGTGGAAGCACCTTGCAAGGAGATCATAATTCTGAAGAAATGCAACAAAATTGGAGATGGGGTTGCATATACTTGCTTGGACATTGTTTTTCATGGGCTGGTTGGATGGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCGGCAAAACTTTCACTCACGGCGTTCACATGCTTCTTCGGATTGATCCAGTTCTTGATCATAGCAGCCTTTGTAGAAACTGACTTACAAAATTGGAAGATAGTATCATTGCAGGAGCTTTTCCTCATTCTATATGCTGGTGGCCCTGTCTTTGTTGCTGCCTTTCAGCCATTGCAAACAGTCCTAGTAGCTCTCATGGCAGCTCTAATTCTTGGTGATCAGTTATACTCTGGAGGGCTTATTGGTGCAATCCTCATTGTGCTTGGTCTATACTTAGTCCTATGGGGAAAAACCAGTGAAAAGAACATGACTGAGTCACCATCACCATTAACAAAGTCCTTGTTGCTGAATGTGGAGGAAGAGATTAAAGTTGACGATGCAGCTTCAAACGACATACCATGA 651 0.427 MASRNGLAKVIGTIASVGGATIITLYKGPPLLHQTHGSGSTLQGDHNSEEMQQNWRWGCIYLLGHCFSWAGWMVFQAPVVKKYPAKLSLTAFTCFFGLIQFLIIAAFVETDLQNWKIVSLQELFLILYAGGPVFVAAFQPLQTVLVALMAALILGDQLYSGGLIGAILIVLGLYLVLWGKTSEKNMTESPSPLTKSLLLNVEEEIKVDDAASNDIP 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60585g00003 216 SUPERFAMILY Multidrug resistance efflux transporter EmrE 124 181 - -
Stsc60585g00003 216 PANTHER WAT1-RELATED PROTEIN 2 186 IPR030184 GO:0016020|GO:0022857
Stsc60585g00003 216 Pfam EamA-like transporter family 57 137 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60585g00003 Stsc-Chr60585 30572 31588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60585g00003 1 213 Nodulin-like Gene Family AT3G18200 54.430 4.57e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60585g00003 - - vum:124833018 293.123