Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60585g00002 ATGGAGGAAAGCACAGAGGGCAAAACCGTAACGGTGGAAGTTGAATCCAAAAAGCGCGAAGCTGATTCGAAAAGCGAGGATCTTGTTGATGTTCCTTCCAAGAAGCCAAAGACGGAAGATTCTTCCATTGTCGAAGCTGCTTTCGAAATTGATGCTGATGCAGCTGAGGATAAGGGTTCTAGGCTCACAATGGAAGATGCTTGGGTCGTGCTTCTAGACGCAACTTTAGATTACCCTGGAAAATTAAGGTGCGCACATTTTGCAATTTATGATGGGCATGGAGGAAGGTTAGCTGCAGAATATGCACAGAAGCATTTGCATGGGAATGTTATGTCAGCTGGATTACCACGTGAGTTGTTGGATGTAAAGGCAGCTAAAAGAGCTATACTTGATGGTTTTCGTAAAACTGATGAGTCTCTTCTCCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCCACAGCTGTCTCTGTCTGGGTATTGGGACAAAAAGTTTTCGTTGCAAATATAGGAGATGCCAAAGCAGTTTTGGCTCGGTCAACTATAAATGATGGATCCCAAGGTAATTCTAATGGAGCCCATGCACTAAAGGCTATTGTTTTGACGAGAGAGCACAAACCTATCTTCCCACAGGAACGTGCACGAATTCAGAAGGTTCAAAATGCTTCAATGATGATTGGCTGGTGGTGTCGTAAGCTCAAATGGGCGGTTACAAGGGCGTCTAGAAGTTTCTAG 735 0.449 MEESTEGKTVTVEVESKKREADSKSEDLVDVPSKKPKTEDSSIVEAAFEIDADAAEDKGSRLTMEDAWVVLLDATLDYPGKLRCAHFAIYDGHGGRLAAEYAQKHLHGNVMSAGLPRELLDVKAAKRAILDGFRKTDESLLQESAEGGWQDGATAVSVWVLGQKVFVANIGDAKAVLARSTINDGSQGNSNGAHALKAIVLTREHKPIFPQERARIQKVQNASMMIGWWCRKLKWAVTRASRSF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60585g00002 244 CDD PP2Cc 50 240 IPR001932 -
Stsc60585g00002 244 SUPERFAMILY PP2C-like 34 239 IPR036457 -
Stsc60585g00002 244 Gene3D - 32 244 IPR036457 -
Stsc60585g00002 244 Pfam Protein phosphatase 2C 55 225 IPR001932 -
Stsc60585g00002 244 ProSiteProfiles PPM-type phosphatase domain profile. 51 244 IPR001932 -
Stsc60585g00002 244 PANTHER PROTEIN PHOSPHATASE 2C 29 240 IPR015655 GO:0004722|GO:0006470
Stsc60585g00002 244 SMART PP2C_4 41 240 IPR001932 -
Stsc60585g00002 244 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60585g00002 Stsc-Chr60585 23809 27896 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60585g00002 4 218 PP2C-type Phosphatase Gene Family AT1G18030 62.844 6.26e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60585g00002 K17500 - mnt:21396468 296.589